RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 TEAD2Q15562 447 aa25.85■■□□□ 1.73
VEGFA-209ENST00000425836 FIGNQ5HY92 759 aa25.85■■□□□ 1.73
VEGFA-209ENST00000425836 POTEHQ6S545 545 aa25.85■■□□□ 1.73
VEGFA-209ENST00000425836 GPIHBP1Q8IV16 184 aa25.85■■□□□ 1.73
VEGFA-209ENST00000425836 NPAS3Q8IXF0 933 aa25.85■■□□□ 1.73
VEGFA-209ENST00000425836 SLC35F5Q8WV83 523 aa25.85■■□□□ 1.73
VEGFA-209ENST00000425836 SECISBP2LQ93073 1101 aaKnown RBP25.85■■□□□ 1.73
VEGFA-209ENST00000425836 NUP58Q9BVL2 599 aa25.85■■□□□ 1.73
VEGFA-209ENST00000425836 EDEM3Q9BZQ6 932 aa25.85■■□□□ 1.73
VEGFA-209ENST00000425836 CDH7Q9ULB5 785 aa25.85■■□□□ 1.73
VEGFA-209ENST00000425836 NR2E1Q9Y466 385 aa25.85■■□□□ 1.73
VEGFA-209ENST00000425836 UNC80Q8N2C7 3258 aa25.85■■□□□ 1.73
VEGFA-209ENST00000425836 TADA3O75528 432 aa25.84■■□□□ 1.73
VEGFA-209ENST00000425836 PLA2G4AP47712 749 aa25.84■■□□□ 1.73
VEGFA-209ENST00000425836 TAF10Q12962 218 aa25.84■■□□□ 1.73
VEGFA-209ENST00000425836 MEA1Q16626 185 aa25.84■■□□□ 1.73
VEGFA-209ENST00000425836 ACSF2Q96CM8 615 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-209ENST00000425836 PCDHGC3Q9UN70 934 aa25.84■■□□□ 1.73
VEGFA-209ENST00000425836 LOC730098B7Z3J9 87 aa25.83■■□□□ 1.73
VEGFA-209ENST00000425836 GPD2P43304 727 aa25.83■■□□□ 1.73
VEGFA-209ENST00000425836 KIF11P52732 1056 aa25.83■■□□□ 1.73
VEGFA-209ENST00000425836 NOP9Q86U38 636 aaKnown RBP25.83■■□□□ 1.73
VEGFA-209ENST00000425836 TDRD5Q8NAT2 981 aaKnown RBP25.83■■□□□ 1.73
VEGFA-209ENST00000425836 DDX1Q92499 740 aaKnown RBP25.83■■□□□ 1.73
VEGFA-209ENST00000425836 MCRS1Q96EZ8 462 aa25.83■■□□□ 1.73
VEGFA-209ENST00000425836 GCNAQ96QF7 691 aa25.83■■□□□ 1.73
VEGFA-209ENST00000425836 MYO6Q9UM54 1294 aa25.83■■□□□ 1.73
VEGFA-209ENST00000425836 ITIH6Q6UXX5 1313 aa25.83■■□□□ 1.73
VEGFA-209ENST00000425836 FAM92AA1XBS5 289 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 LAMP2P13473 410 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 KRT9P35527 623 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 PDE6CP51160 858 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 CYP4F8P98187 520 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 RAB41Q5JT25 222 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 PMF1Q6P1K2 205 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 EPS8L1Q8TE68 723 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 FBXO32Q969P5 355 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 FBXO44Q9H4M3 255 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 GDE1Q9NZC3 331 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 USP3Q9Y6I4 520 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 C5orf42Q9H799 3197 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 NOTCH4Q99466 2003 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 STXBP5Q5T5C0 1151 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 KCTD13Q8WZ19 329 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 ZSWIM3Q96MP5 696 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 SLITRK1Q96PX8 696 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 TRIM5Q9C035 493 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 EPS15L1Q9UBC2 864 aa25.82■■□□□ 1.72
VEGFA-209ENST00000425836 NOCTQ9UK39 431 aaKnown RBP25.82■■□□□ 1.72
VEGFA-209ENST00000425836 ZFP37Q9Y6Q3 630 aaPredicted RBP25.82■■□□□ 1.72
VEGFA-209ENST00000425836 C19orf67A6NJJ6 358 aa25.81■■□□□ 1.72
VEGFA-209ENST00000425836 LRRC53A6NM62 1247 aa25.81■■□□□ 1.72
VEGFA-209ENST00000425836 RGS7P49802 495 aa25.81■■□□□ 1.72
VEGFA-209ENST00000425836 ARID5AQ03989 594 aa25.81■■□□□ 1.72
VEGFA-209ENST00000425836 TAF3Q5VWG9 929 aa25.81■■□□□ 1.72
VEGFA-209ENST00000425836 LHX5Q9H2C1 402 aa25.81■■□□□ 1.72
VEGFA-209ENST00000425836 TRPM5Q9NZQ8 1165 aa25.81■■□□□ 1.72
VEGFA-209ENST00000425836 CHORDC1Q9UHD1 332 aaPredicted RBP25.81■■□□□ 1.72
VEGFA-209ENST00000425836 SCML2Q9UQR0 700 aa25.81■■□□□ 1.72
VEGFA-209ENST00000425836 DOCK6Q96HP0 2047 aa25.81■■□□□ 1.72
VEGFA-209ENST00000425836 A0A1W2PQJ5 194 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 ZNF840PA6NDX5 716 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 GABBR2O75899 941 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 ARHGAP15Q53QZ3 475 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 GPR158Q5T848 1215 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 SPECC1LQ69YQ0 1117 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 PASD1Q8IV76 773 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 VSTM4Q8IW00 320 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 ZDHHC14Q8IZN3 488 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 PLCD3Q8N3E9 789 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 WDTC1Q8N5D0 677 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 ADAMTS19Q8TE59 1207 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 SLC20A1Q8WUM9 679 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 OVCA2Q8WZ82 227 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 MRPS31Q92665 395 aaKnown RBP25.8■■□□□ 1.72
VEGFA-209ENST00000425836 IQCDQ96DY2 449 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 HSFY1Q96LI6 401 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 NECAB3Q96P71 396 aaPredicted RBP25.8■■□□□ 1.72
VEGFA-209ENST00000425836 LRRC4Q9HBW1 653 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 CYTH4Q9UIA0 394 aa25.8■■□□□ 1.72
VEGFA-209ENST00000425836 FERP16591 822 aa25.79■■□□□ 1.72
VEGFA-209ENST00000425836 PPP3CCP48454 512 aa25.79■■□□□ 1.72
VEGFA-209ENST00000425836 TKTL1P51854 596 aa25.79■■□□□ 1.72
VEGFA-209ENST00000425836 TXNDC8Q6A555 127 aa25.79■■□□□ 1.72
VEGFA-209ENST00000425836 IRF2BP2Q7Z5L9 587 aa25.79■■□□□ 1.72
VEGFA-209ENST00000425836 CPLX3Q8WVH0 158 aa25.79■■□□□ 1.72
VEGFA-209ENST00000425836 SLC46A2Q9BY10 475 aa25.79■■□□□ 1.72
VEGFA-209ENST00000425836 SLITRK6Q9H5Y7 841 aa25.79■■□□□ 1.72
VEGFA-209ENST00000425836 TASP1Q9H6P5 420 aa25.79■■□□□ 1.72
VEGFA-209ENST00000425836 GMIPQ9P107 970 aa25.79■■□□□ 1.72
VEGFA-209ENST00000425836 CAPN11Q9UMQ6 739 aa25.79■■□□□ 1.72
VEGFA-209ENST00000425836 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.79■■□□□ 1.725e-8■■□□□ 14.3
VEGFA-209ENST00000425836 DENND4AQ7Z401 1863 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 GYPCP04921 128 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 MMEP08473 750 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 ZDHHC11BP0C7U3 371 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 PGFP49763 221 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 CDR2Q01850 454 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 ZNF677Q86XU0 584 aa25.78■■□□□ 1.72
VEGFA-209ENST00000425836 PDZD8Q8NEN9 1154 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms