RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 KRT17Q04695 432 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 PPP1R7Q15435 360 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 ZDHHC24Q6UX98 284 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 SLC24A5Q71RS6 500 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 ATL2Q8NHH9 583 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 SYT15Q9BQS2 421 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 I3L4J1 428 aa27.79■■■□□ 2.04
LDB1-202ENST00000425280 B3GAT3O94766 335 aa27.79■■■□□ 2.04
LDB1-202ENST00000425280 SCNN1AP37088 669 aa27.79■■■□□ 2.04
LDB1-202ENST00000425280 ALS2CLQ60I27 953 aa27.79■■■□□ 2.04
LDB1-202ENST00000425280 CYP4V2Q6ZWL3 525 aaPredicted RBP27.79■■■□□ 2.04
LDB1-202ENST00000425280 PIGZQ86VD9 579 aa27.79■■■□□ 2.04
LDB1-202ENST00000425280 CMASQ8NFW8 434 aaPredicted RBP27.79■■■□□ 2.04
LDB1-202ENST00000425280 GRK7Q8WTQ7 553 aa27.79■■■□□ 2.04
LDB1-202ENST00000425280 DNM1LO00429 736 aa27.79■■■□□ 2.04
LDB1-202ENST00000425280 SYF2O95926 243 aaKnown RBP27.79■■■□□ 2.04
LDB1-202ENST00000425280 FAM193AP78312 1265 aa27.79■■■□□ 2.04
LDB1-202ENST00000425280 TAZQ16635 292 aa27.79■■■□□ 2.04
LDB1-202ENST00000425280 CDO1Q16878 200 aa27.79■■■□□ 2.04
LDB1-202ENST00000425280 PAN2Q504Q3 1202 aaKnown RBP27.79■■■□□ 2.04
LDB1-202ENST00000425280 LRRC8DQ7L1W4 858 aa27.79■■■□□ 2.04
LDB1-202ENST00000425280 SLC26A9Q7LBE3 791 aa27.79■■■□□ 2.04
LDB1-202ENST00000425280 MED4Q9NPJ6 270 aa27.79■■■□□ 2.04
LDB1-202ENST00000425280 FEZ2Q9UHY8 353 aaPredicted RBP27.79■■■□□ 2.04
LDB1-202ENST00000425280 BEST1O76090 585 aa27.78■■■□□ 2.04
LDB1-202ENST00000425280 EOMESO95936 686 aa27.78■■■□□ 2.04
LDB1-202ENST00000425280 NPR3P17342 541 aa27.78■■■□□ 2.04
LDB1-202ENST00000425280 SDC4P31431 198 aa27.78■■■□□ 2.04
LDB1-202ENST00000425280 CDR1P51861 262 aa27.78■■■□□ 2.04
LDB1-202ENST00000425280 FAM189BP81408 668 aa27.78■■■□□ 2.04
LDB1-202ENST00000425280 ATP11AP98196 1134 aa27.78■■■□□ 2.04
LDB1-202ENST00000425280 PLCB3Q01970 1234 aa27.78■■■□□ 2.04
LDB1-202ENST00000425280 HSP90B2PQ58FF3 399 aa27.78■■■□□ 2.04
LDB1-202ENST00000425280 SYDE1Q6ZW31 735 aaPredicted RBP27.78■■■□□ 2.04
LDB1-202ENST00000425280 UROC1Q96N76 676 aa27.78■■■□□ 2.04
LDB1-202ENST00000425280 FMO2Q99518 471 aa27.78■■■□□ 2.04
LDB1-202ENST00000425280 MED10Q9BTT4 135 aa27.78■■■□□ 2.04
LDB1-202ENST00000425280 EFR3BQ9Y2G0 817 aa27.78■■■□□ 2.04
LDB1-202ENST00000425280 HSF2BPO75031 334 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 ODC1P11926 461 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 SELPP16109 830 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 GBP1P32455 592 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 BRCC3P46736 316 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 PLTPP55058 493 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 SLC8A3P57103 927 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 PIK3R5Q8WYR1 880 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 HSPH1Q92598 858 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 CCDC114Q96M63 670 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 CDH9Q9ULB4 789 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 TSC2P49815 1807 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 MYBPHLA2RUH7 354 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 POLR3GO15318 223 aaPredicted RBP27.77■■■□□ 2.04
LDB1-202ENST00000425280 CD48P09326 243 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 PTK6Q13882 451 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 CLEC20AQ6ZU45 233 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 FAM126BQ8IXS8 530 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 IQCKQ8N0W5 287 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 KCTD6Q8NC69 237 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 LRRC45Q96CN5 670 aa27.77■■■□□ 2.04
LDB1-202ENST00000425280 LIASO43766 372 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 GAS8O95995 478 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 MYCP01106 439 aaPredicted RBP27.76■■■□□ 2.03
LDB1-202ENST00000425280 ARCQ7LC44 396 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 TMC3Q7Z5M5 1100 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 FAM71BQ8TC56 605 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 FBXO25Q8TCJ0 367 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 HASPINQ8TF76 798 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 FAM172AQ8WUF8 416 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 RIN2Q8WYP3 895 aaPredicted RBP27.76■■■□□ 2.03
LDB1-202ENST00000425280 RTP3Q9BQQ7 232 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 SEZ6LQ9BYH1 1024 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 PAK6Q9NQU5 681 aaPredicted RBP27.76■■■□□ 2.03
LDB1-202ENST00000425280 NEU2Q9Y3R4 380 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 CLLU1OSQ5K130 101 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 CFAP58Q5T655 872 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 GLB1LQ6UWU2 654 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 ZIM3Q96PE6 472 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 NGRNQ9NPE2 291 aaKnown RBP27.76■■■□□ 2.03
LDB1-202ENST00000425280 KRT82Q9NSB4 513 aa27.76■■■□□ 2.03
LDB1-202ENST00000425280 M0QZQ0 153 aa27.75■■■□□ 2.03
LDB1-202ENST00000425280 PRPSAP2O60256 369 aa27.75■■■□□ 2.03
LDB1-202ENST00000425280 CYP11A1P05108 521 aa27.75■■■□□ 2.03
LDB1-202ENST00000425280 ADIGQ0VDE8 80 aa27.75■■■□□ 2.03
LDB1-202ENST00000425280 DRICH1Q6PGQ1 229 aaPredicted RBP27.75■■■□□ 2.03
LDB1-202ENST00000425280 KCTD13Q8WZ19 329 aa27.75■■■□□ 2.03
LDB1-202ENST00000425280 PCED1BQ96HM7 432 aa27.75■■■□□ 2.03
LDB1-202ENST00000425280 DNPEPQ9ULA0 475 aa27.75■■■□□ 2.03
LDB1-202ENST00000425280 FAM200BP0CF97 657 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 PAX3P23760 479 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 PCSK1P29120 753 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 PTPN9P43378 593 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 MTFR1Q15390 333 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 DCLRE1AQ6PJP8 1040 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 FAM35AQ86V20 835 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 MYCBPAPQ8TBZ2 947 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 SPATA18Q8TC71 538 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 C11orf84Q9BUA3 381 aaPredicted RBP27.74■■■□□ 2.03
LDB1-202ENST00000425280 B4GALT3O60512 393 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 ITGB1P05556 798 aa27.74■■■□□ 2.03
LDB1-202ENST00000425280 TFE3P19532 575 aaPredicted RBP27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms