RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 OSMRQ99650 979 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 ZNF518BQ9C0D4 1074 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 CDHR5Q9HBB8 845 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 METTL5Q9NRN9 209 aaKnown RBP11.18□□□□□ -0.62
CUX1-205ENST00000425244 DDX56Q9NY93 547 aaKnown RBP11.18□□□□□ -0.62
CUX1-205ENST00000425244 CYTH4Q9UIA0 394 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 NRCAMQ92823 1304 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 PIK3R2O00459 728 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 ABLIM1O14639 778 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 ASGR1P07306 291 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 NFICP08651 508 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 POLR2BP30876 1174 aaKnown RBP11.18□□□□□ -0.62
CUX1-205ENST00000425244 FOXN2P32314 431 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 PHKA2P46019 1235 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 GDF10P55107 478 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 OASLQ15646 514 aaKnown RBP11.18□□□□□ -0.62
CUX1-205ENST00000425244 PKN2Q16513 984 aaKnown RBP11.18□□□□□ -0.62
CUX1-205ENST00000425244 ZNF667Q5HYK9 610 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 PPP1R15BQ5SWA1 713 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 PPP1R21Q6ZMI0 780 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 CENPUQ71F23 418 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 SH3TC2Q8TF17 1288 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 HSPH1Q92598 858 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 C2orf40Q9H1Z8 148 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 TRABDQ9H4I3 376 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 SMYD3Q9H7B4 428 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 RPF1Q9H9Y2 349 aaKnown RBP11.18□□□□□ -0.62
CUX1-205ENST00000425244 HMGXB4Q9UGU5 601 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 STRIP2Q9ULQ0 834 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 PPME1Q9Y570 386 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 CHUKO15111 745 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 FKTNO75072 461 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 LRCH4O75427 683 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 OAS1P00973 400 aaKnown RBP11.17□□□□□ -0.62
CUX1-205ENST00000425244 IGHA2P01877 340 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 ABHD2P08910 425 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 CD48P09326 243 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 CTCFP49711 727 aaPredicted RBP11.17□□□□□ -0.62
CUX1-205ENST00000425244 COPS2P61201 443 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 YWHAEP62258 255 aaKnown RBP11.17□□□□□ -0.62
CUX1-205ENST00000425244 IL9RQ01113 521 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 TAP1Q03518 808 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 MBTD1Q05BQ5 628 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 MORF4L2Q15014 288 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 SURF1Q15526 300 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 KCNA10Q16322 511 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 RNASEH2BQ5TBB1 312 aaKnown RBP11.17□□□□□ -0.62
CUX1-205ENST00000425244 RELL1Q8IUW5 271 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 RSAD2Q8WXG1 361 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 SPOCK2Q92563 424 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 TTC25Q96NG3 672 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 CPXM1Q96SM3 734 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 FOXP3Q9BZS1 431 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 ECT2Q9H8V3 914 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 BAIAP2L1Q9UHR4 511 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 ARL2BPQ9Y2Y0 163 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 ACKR2O00590 384 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 HMGCRP04035 888 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 GCAP28676 217 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 WDR4P57081 412 aaKnown RBP11.17□□□□□ -0.62
CUX1-205ENST00000425244 ELF3P78545 371 aaPredicted RBP11.17□□□□□ -0.62
CUX1-205ENST00000425244 TAF5Q15542 800 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 HIF1AQ16665 826 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 HADHQ16836 314 aaKnown RBP11.17□□□□□ -0.62
CUX1-205ENST00000425244 ANKRD22Q5VYY1 191 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 DRICH1Q6PGQ1 229 aaPredicted RBP11.17□□□□□ -0.62
CUX1-205ENST00000425244 TSHZ1Q6ZSZ6 1077 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 TRABD2AQ86V40 505 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 RFX6Q8HWS3 928 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 KIF2BQ8N4N8 673 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 KCTD6Q8NC69 237 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 MAML1Q92585 1016 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 NKD2Q969F2 451 aaPredicted RBP11.17□□□□□ -0.62
CUX1-205ENST00000425244 RMDN2Q96LZ7 410 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 MAGEB18Q96M61 343 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 TWNKQ96RR1 684 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 CALN1Q9BXU9 219 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 PITPNM3Q9BZ71 974 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 CDT1Q9H211 546 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 PCDH9Q9HC56 1237 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 PCDHGC3Q9UN70 934 aa11.17□□□□□ -0.62
CUX1-205ENST00000425244 DRG1Q9Y295 367 aaKnown RBP11.17□□□□□ -0.62
CUX1-205ENST00000425244 C17orf102A2RUQ5 167 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 RRN3P2A6NIE6 340 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 TTC36A6NLP5 189 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 ERBB2P04626 1255 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 ITGB3P05106 788 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 INHAP05111 366 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 ITGAVP06756 1048 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 GSTA1P08263 222 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 KCNJ2P63252 427 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 DNAJC3Q13217 504 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 EFTUD2Q15029 972 aaKnown RBP eCLIP11.16□□□□□ -0.628e-8■■■■□ 20.9
CUX1-205ENST00000425244 E2F5Q15329 346 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 SYCP2LQ5T4T6 812 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 ARFGAP1Q8N6T3 406 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 PRCCQ92733 491 aaPredicted RBP11.16□□□□□ -0.62
CUX1-205ENST00000425244 SMC6Q96SB8 1091 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 KATNAL1Q9BW62 490 aa11.16□□□□□ -0.62
CUX1-205ENST00000425244 SDCBP2Q9H190 292 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms