RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 USP17L7P0C7H9 530 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 TCF3P15923 654 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 RFX1P22670 979 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 TARSP26639 723 aaKnown RBP18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 YWHAQP27348 245 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 ADORA2BP29275 332 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 SLC5A3P53794 718 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 RAD23BP54727 409 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 PLCB2Q00722 1185 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 CUL2Q13617 745 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 ZNF394Q53GI3 561 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 ZNF852Q6ZMS4 543 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 CLEC20AQ6ZU45 233 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 OVCA2Q8WZ82 227 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 FAM122AQ96E09 287 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 TMEM176AQ96HP8 235 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 GTSE1Q9NYZ3 720 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 PIAS3Q9Y6X2 628 aa18.97■□□□□ 0.63
IGHV3-47-201ENST00000425060 MAN2B1O00754 1011 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 OAS1P00973 400 aaKnown RBP18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 ZDHHC11BP0C7U3 371 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 HDCP19113 662 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 TRIM21P19474 475 aaKnown RBP18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 MAP3K7CLP57077 242 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 ZXDBP98169 803 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 KCNH2Q12809 1159 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 UBXN2BQ14CS0 331 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 ZNF77Q15935 545 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 PPP1R26Q5T8A7 1209 aaPredicted RBP18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 SNX30Q5VWJ9 437 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 IRF2BP1Q8IU81 584 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 CSGALNACT1Q8TDX6 532 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 CLDN23Q96B33 292 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 SLITRK1Q96PX8 696 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 RNF38Q9H0F5 515 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 NUP62CLQ9H1M0 184 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 GKN1Q9NS71 199 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 THG1LQ9NWX6 298 aaKnown RBP18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 ARHGAP26Q9UNA1 814 aa18.96■□□□□ 0.63
IGHV3-47-201ENST00000425060 FGFR1OPO95684 399 aaKnown RBP18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 CKMP06732 381 aa18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 FAM200BP0CF97 657 aa18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 SLC7A9P82251 487 aa18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 TNK2Q07912 1038 aa18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 IFRD2Q12894 506 aaPredicted RBP18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 USP4Q13107 963 aa18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 EHBP1Q8NDI1 1231 aa18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 PDZD8Q8NEN9 1154 aa18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 GPT2Q8TD30 523 aa18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 FBXO32Q969P5 355 aa18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 HEXIM2Q96MH2 286 aaKnown RBP18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 GBP4Q96PP9 640 aa18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 DUSP16Q9BY84 665 aa18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 C8orf33Q9H7E9 229 aaPredicted RBP18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 HPS4Q9NQG7 708 aa18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 CHORDC1Q9UHD1 332 aaPredicted RBP18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 MRPS17Q9Y2R5 130 aaKnown RBP18.95■□□□□ 0.62
IGHV3-47-201ENST00000425060 H0Y858 1186 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 CCDC192P0DO97 292 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 TBXAS1P24557 533 aaPredicted RBP18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 SOX9P48436 509 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 PGFP49763 221 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 PDE6CP51160 858 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 LRMPQ12912 555 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 MTF1Q14872 753 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 ARHGAP17Q68EM7 881 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 GPRIN1Q7Z2K8 1008 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 FAM3CQ92520 227 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 MSANTD3Q96H12 275 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 IRF2BPLQ9H1B7 796 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 PNPLA8Q9NP80 782 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 MIA3Q5JRA6 1907 aa18.94■□□□□ 0.62
IGHV3-47-201ENST00000425060 PATJQ8NI35 1801 aa18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 OTOL1A6NHN0 477 aaPredicted RBP18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 AFPP02771 609 aaKnown RBP18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 ACO1P21399 889 aaKnown RBP18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 CTHP32929 405 aa18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 RPS9P46781 194 aaKnown RBP18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 RUNX3Q13761 415 aa18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 ITPRIPL2Q3MIP1 535 aa18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 DPCR1Q3MIW9 517 aa18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 TRIM68Q6AZZ1 485 aa18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 TXNDC11Q6PKC3 985 aa18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 RALGPS2Q86X27 583 aaPredicted RBP18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 TTC8Q8TAM2 541 aa18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 SH3RF2Q8TEC5 729 aa18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 CHFRQ96EP1 664 aa18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 NT5C1BQ96P26 610 aa18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 DNAI2Q9GZS0 605 aa18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 FBXO44Q9H4M3 255 aa18.93■□□□□ 0.62
IGHV3-47-201ENST00000425060 MYH10P35580 1976 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 SPECC1L-ADORA2AF8WAN1 911 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 NCAM2O15394 837 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 ABL1P00519 1130 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 ERCC5P28715 1186 aaPredicted RBP18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 MAGEA9P43362 315 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 KPNA1P52294 538 aaPredicted RBP18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 KIF11P52732 1056 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 YWHAEP62258 255 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms