RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 NECTIN4Q96NY8 510 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 SLC29A1Q99808 456 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 CCDC28BQ9BUN5 200 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 CNNM1Q9NRU3 951 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 PLSCR3Q9NRY6 295 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 GRHL1Q9NZI5 618 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 MRPS7Q9Y2R9 242 aaKnown RBP7.12□□□□□ -1.27
CNOT4-205ENST00000423368 PCDHB2Q9Y5E7 798 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 PCDHGA7Q9Y5G6 932 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 PALLDQ8WX93 1383 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 STK36Q9NRP7 1315 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 PRR5-ARHGAP8B1AHC4 643 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 GOLGA8SH3BPF8 625 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 FOXP2O15409 715 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 CLIC3O95833 236 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 BMPR1AP36894 532 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 ARHGAP8P85298 464 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 IKQ13123 557 aaPredicted RBP7.12□□□□□ -1.27
CNOT4-205ENST00000423368 MAPK7Q13164 816 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 SNTA1Q13424 505 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 ACVR2BQ13705 512 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 GRM2Q14416 872 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 AARS2Q5JTZ9 985 aaKnown RBP7.12□□□□□ -1.27
CNOT4-205ENST00000423368 ATAD3BQ5T9A4 648 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 TTC27Q6P3X3 843 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 DENND5BQ6ZUT9 1274 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 PIWIL3Q7Z3Z3 882 aaKnown RBP7.12□□□□□ -1.27
CNOT4-205ENST00000423368 GLRX5Q86SX6 157 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 CPNE8Q86YQ8 564 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 BEND7Q8N7W2 519 aaPredicted RBP7.12□□□□□ -1.27
CNOT4-205ENST00000423368 KBTBD7Q8WVZ9 684 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 PTCD3Q96EY7 689 aaKnown RBP7.12□□□□□ -1.27
CNOT4-205ENST00000423368 ZNF486Q96H40 463 aaPredicted RBP7.12□□□□□ -1.27
CNOT4-205ENST00000423368 ZFRQ96KR1 1074 aaKnown RBP7.12□□□□□ -1.27
CNOT4-205ENST00000423368 HEXIM2Q96MH2 286 aaKnown RBP7.12□□□□□ -1.27
CNOT4-205ENST00000423368 IL12RB2Q99665 862 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 FAM126AQ9BYI3 521 aaPredicted RBP7.12□□□□□ -1.27
CNOT4-205ENST00000423368 OSBPL8Q9BZF1 889 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 MAGEE1Q9HCI5 957 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 QPCTLQ9NXS2 382 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 ANKFY1Q9P2R3 1169 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 FAM8A1Q9UBU6 413 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 FBXO40Q9UH90 709 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 AMFRQ9UKV5 643 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 ABCC3O15438 1527 aa7.12□□□□□ -1.27
CNOT4-205ENST00000423368 PLCH2O75038 1416 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 ILVBLA1L0T0 632 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 C12orf71A8MTZ7 269 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 SPOPO43791 374 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 B4GALT4O60513 344 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 DLATP10515 647 aaKnown RBP7.11□□□□□ -1.27
CNOT4-205ENST00000423368 EEF1B2P24534 225 aaKnown RBP7.11□□□□□ -1.27
CNOT4-205ENST00000423368 EEF1DP29692 281 aaKnown RBP7.11□□□□□ -1.27
CNOT4-205ENST00000423368 KRT2P35908 639 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 ACADVLP49748 655 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 TUBA4AP68366 448 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 FPGSQ05932 587 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 NIPAL4Q0D2K0 466 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 ELOAQ14241 798 aaKnown RBP7.11□□□□□ -1.27
CNOT4-205ENST00000423368 CHRNA2Q15822 529 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 VPS72Q15906 364 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 PROSER3Q2NL68 480 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 TRMT5Q32P41 509 aaKnown RBP7.11□□□□□ -1.27
CNOT4-205ENST00000423368 EFHC1Q5JVL4 640 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 ADGRG6Q86SQ4 1221 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 TICAM1Q8IUC6 712 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 LRRC47Q8N1G4 583 aaKnown RBP7.11□□□□□ -1.27
CNOT4-205ENST00000423368 TMEM35BQ8NCS4 154 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 P2RX5Q93086 422 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 WASH6PQ9NQA3 447 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 FARSBQ9NSD9 589 aaKnown RBP7.11□□□□□ -1.27
CNOT4-205ENST00000423368 CNOT7Q9UIV1 285 aaKnown RBP7.11□□□□□ -1.27
CNOT4-205ENST00000423368 NADKO95544 446 aaPredicted RBP7.11□□□□□ -1.27
CNOT4-205ENST00000423368 DLGAP3O95886 979 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 MCF2P10911 925 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 ATP5DP30049 168 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 GRM5P41594 1212 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 YAP1P46937 504 aaKnown RBP7.11□□□□□ -1.27
CNOT4-205ENST00000423368 CDK9P50750 372 aaKnown RBP7.11□□□□□ -1.27
CNOT4-205ENST00000423368 AKR1D1P51857 326 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 RAD23AP54725 363 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 MARSP56192 900 aaKnown RBP7.11□□□□□ -1.27
CNOT4-205ENST00000423368 ESRRGP62508 458 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 ECT2LQ008S8 904 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 CHRNEQ04844 493 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 SLC18A3Q16572 532 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 C2CD6Q53TS8 623 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 KCNT2Q6UVM3 1135 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 SLC30A10Q6XR72 485 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 TRIM72Q6ZMU5 477 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 SNX32Q86XE0 403 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 ANKRD13BQ86YJ7 626 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 CCDC28AQ8IWP9 274 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 ANKRD13AQ8IZ07 590 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 KBTBD3Q8NAB2 608 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 OR5H6Q8NGV6 325 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 ALG3Q92685 438 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 COG3Q96JB2 828 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 MAGED4Q96JG8 741 aa7.11□□□□□ -1.27
CNOT4-205ENST00000423368 MARK4Q96L34 752 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms