RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 OSCP1Q8WVF1 389 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 RUBCNQ92622 972 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 CCDC34Q96HJ3 373 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 KCNK16Q96T55 309 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 MED10Q9BTT4 135 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 FAM126AQ9BYI3 521 aaPredicted RBP16.14■□□□□ 0.17
USB1-202ENST00000423271 EPC1Q9H2F5 836 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 ECT2Q9H8V3 914 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 FBRSL1Q9HCM7 1045 aaKnown RBP16.14■□□□□ 0.17
USB1-202ENST00000423271 SMG5Q9UPR3 1016 aaKnown RBP16.14■□□□□ 0.17
USB1-202ENST00000423271 K7ESF4 209 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 TRDMT1O14717 391 aaKnown RBP16.13■□□□□ 0.17
USB1-202ENST00000423271 IKBKBO14920 756 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 MAPK13O15264 365 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 ABL1P00519 1130 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 CCDC130P13994 396 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 GJA4P35212 333 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 NDST1P52848 882 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 PPP2R5DQ14738 602 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 EML3Q32P44 896 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 KIAA2013Q8IYS2 634 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 FUKQ8N0W3 1084 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 CPA6Q8N4T0 437 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 TAS1R2Q8TE23 839 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 TAF4BQ92750 862 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 ERCC4Q92889 916 aaPredicted RBP16.13■□□□□ 0.17
USB1-202ENST00000423271 TNIP3Q96KP6 325 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 RNF38Q9H0F5 515 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 LINC00597Q9H2U6 94 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 MMRN2Q9H8L6 949 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 APOBEC3GQ9HC16 384 aaKnown RBP16.13■□□□□ 0.17
USB1-202ENST00000423271 KRT82Q9NSB4 513 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 LMBRD1Q9NUN5 540 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 EHD2Q9NZN4 543 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 DNAH14Q0VDD8 3507 aa16.13■□□□□ 0.17
USB1-202ENST00000423271 CHURC1-FNTBB4DL54 471 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 LEFTY2O00292 366 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 PAPSS2O95340 614 aaPredicted RBP16.12■□□□□ 0.17
USB1-202ENST00000423271 OLFM2O95897 454 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 OAS1P00973 400 aaKnown RBP16.12■□□□□ 0.17
USB1-202ENST00000423271 EGFP01133 1207 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 P4HA1P13674 534 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 TCF3P15923 654 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 FNTBP49356 437 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 NRLP54845 237 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 GRSF1Q12849 480 aaKnown RBP eCLIP16.12■□□□□ 0.17
USB1-202ENST00000423271 ADAM9Q13443 819 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 INTS8Q75QN2 995 aaKnown RBP16.12■□□□□ 0.17
USB1-202ENST00000423271 NUP93Q8N1F7 819 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 SYNPOQ8N3V7 929 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 SCAMP5Q8TAC9 235 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 ATP2A3Q93084 1043 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 EEF2KMTQ96G04 330 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 SMARCD1Q96GM5 515 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 SLITRK1Q96PX8 696 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 TWNKQ96RR1 684 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 DMAP1Q9NPF5 467 aaPredicted RBP16.12■□□□□ 0.17
USB1-202ENST00000423271 FAM49BQ9NUQ9 324 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 SMPD4Q9NXE4 827 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 CPQQ9Y646 472 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 MYH10P35580 1976 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 ATP8B3O60423 1300 aa16.12■□□□□ 0.17
USB1-202ENST00000423271 TNFRSF10BO14763 440 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 SCAMP3O14828 347 aaKnown RBP16.11■□□□□ 0.17
USB1-202ENST00000423271 AP1G2O75843 785 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 KRT13P13646 458 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 PFKLP17858 780 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 RPL13P26373 211 aaKnown RBP16.11■□□□□ 0.17
USB1-202ENST00000423271 YWHAQP27348 245 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 PSMC2P35998 433 aaKnown RBP16.11■□□□□ 0.17
USB1-202ENST00000423271 PPP3CCP48454 512 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 PDE6CP51160 858 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 GALK1P51570 392 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 SLC5A3P53794 718 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 SLC7A9P82251 487 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 SRSF5Q13243 272 aaKnown RBP16.11■□□□□ 0.17
USB1-202ENST00000423271 LPAL2Q16609 132 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 HEATR6Q6AI08 1181 aaKnown RBP16.11■□□□□ 0.17
USB1-202ENST00000423271 C12orf29Q8N999 325 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 ZMIZ2Q8NF64 920 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 SLC2A14Q8TDB8 520 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 EZH1Q92800 747 aaPredicted RBP16.11■□□□□ 0.17
USB1-202ENST00000423271 FBXO32Q969P5 355 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 SMOQ99835 787 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 P2RY13Q9BPV8 354 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 POLR3BQ9NW08 1133 aaPredicted RBP16.11■□□□□ 0.17
USB1-202ENST00000423271 NCDNQ9UBB6 729 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 MYO16Q9Y6X6 1858 aa16.11■□□□□ 0.17
USB1-202ENST00000423271 RNF40O75150 1001 aa16.1■□□□□ 0.17
USB1-202ENST00000423271 BEST1O76090 585 aa16.1■□□□□ 0.17
USB1-202ENST00000423271 RTN3O95197 1032 aaPredicted RBP16.1■□□□□ 0.17
USB1-202ENST00000423271 EDRF1Q3B7T1 1238 aa16.1■□□□□ 0.17
USB1-202ENST00000423271 UNC93AQ86WB7 457 aa16.1■□□□□ 0.17
USB1-202ENST00000423271 ELOA2Q8IYF1 753 aaPredicted RBP16.1■□□□□ 0.17
USB1-202ENST00000423271 CRYBG2Q8N1P7 616 aa16.1■□□□□ 0.17
USB1-202ENST00000423271 TMEM8AQ9HCN3 771 aa16.1■□□□□ 0.17
USB1-202ENST00000423271 GMIPQ9P107 970 aa16.1■□□□□ 0.17
USB1-202ENST00000423271 HOOK1Q9UJC3 728 aaKnown RBP16.1■□□□□ 0.17
USB1-202ENST00000423271 PCDHA5Q9Y5H7 936 aa16.1■□□□□ 0.17
USB1-202ENST00000423271 KIAA1549LQ6ZVL6 1849 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms