RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 MED7O43513 233 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 CYP11B1P15538 503 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 GJA1P17302 382 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 SP100P23497 879 aaPredicted RBP9.8□□□□□ -0.84
PDGFC-202ENST00000422544 FSHRP23945 695 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 GABRR2P28476 465 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 EPHA5P54756 1037 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 BPIFB4P59827 614 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 NHLH1Q02575 133 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 ARID5AQ03989 594 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 PDE4CQ08493 712 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 IFRD2Q12894 506 aaPredicted RBP9.8□□□□□ -0.84
PDGFC-202ENST00000422544 STILQ15468 1287 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 PKDCCQ504Y2 493 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 SMYD5Q6GMV2 418 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 DENND1BQ6P3S1 775 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 SARM1Q6SZW1 724 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 DENND5BQ6ZUT9 1274 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 PIGZQ86VD9 579 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 NUP93Q8N1F7 819 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 SCAMP5Q8TAC9 235 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 CPLX3Q8WVH0 158 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 BAP1Q92560 729 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 SECISBP2LQ93073 1101 aaKnown RBP9.8□□□□□ -0.84
PDGFC-202ENST00000422544 CEP295NLQ96MC4 621 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 NUP58Q9BVL2 599 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 IL21Q9HBE4 155 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 FAM50BQ9Y247 325 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 MRPS23Q9Y3D9 190 aaKnown RBP9.8□□□□□ -0.84
PDGFC-202ENST00000422544 CLUHO75153 1309 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 FAM186AA6NE01 2351 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 A0A1W2PRU2 124 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 M0QYV0 167 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 ZNF197O14709 1029 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 XPO1O14980 1071 aaKnown RBP9.79□□□□□ -0.84
PDGFC-202ENST00000422544 MOSPD3O75425 235 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 F11P03951 625 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 KRT9P35527 623 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 SLC5A3P53794 718 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 BCAT1P54687 386 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 SLC8A3P57103 927 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 BST2Q10589 180 aaKnown RBP9.79□□□□□ -0.84
PDGFC-202ENST00000422544 TAF10Q12962 218 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 FIGNQ5HY92 759 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 PRSS36Q5K4E3 855 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 TAF3Q5VWG9 929 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 GAREM2Q75VX8 874 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 GET4Q7L5D6 327 aaPredicted RBP9.79□□□□□ -0.84
PDGFC-202ENST00000422544 GPRIN1Q7Z2K8 1008 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 NOP9Q86U38 636 aaKnown RBP9.79□□□□□ -0.84
PDGFC-202ENST00000422544 PASD1Q8IV76 773 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 VSTM4Q8IW00 320 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 LEMD2Q8NC56 503 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 SHKBP1Q8TBC3 707 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 SLC35F5Q8WV83 523 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 ING5Q8WYH8 240 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 RPGRIP1Q96KN7 1286 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 MYRFLQ96LU7 910 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 MYADMQ96S97 322 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 PHF7Q9BWX1 381 aaPredicted RBP9.79□□□□□ -0.84
PDGFC-202ENST00000422544 UBXN6Q9BZV1 441 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 TTYH3Q9C0H2 523 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 ATXN3LQ9H3M9 355 aa9.79□□□□□ -0.84
PDGFC-202ENST00000422544 AVENQ9NQS1 362 aaPredicted RBP9.79□□□□□ -0.84
PDGFC-202ENST00000422544 PTPRZ1P23471 2315 aaPredicted RBP9.79□□□□□ -0.84
PDGFC-202ENST00000422544 C19orf67A6NJJ6 358 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 LRRC53A6NM62 1247 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 PRR33A8MZF0 331 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 PIK3R2O00459 728 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 GABBR2O75899 941 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 RTN3O95197 1032 aaPredicted RBP9.78□□□□□ -0.84
PDGFC-202ENST00000422544 FGF19O95750 216 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 MMEP08473 750 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 SETSIPP0DME0 302 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 CEBPBP17676 345 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 YWHAQP27348 245 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 GBP2P32456 591 aaPredicted RBP9.78□□□□□ -0.84
PDGFC-202ENST00000422544 GPD2P43304 727 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 RGS7P49802 495 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 PDE6CP51160 858 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 ZNF75DP51815 510 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 KIF11P52732 1056 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 CYP4F8P98187 520 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 TEAD2Q15562 447 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 SPECC1LQ69YQ0 1117 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 PMF1Q6P1K2 205 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 IRF2BP2Q7Z5L9 587 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 TMEM150AQ86TG1 271 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 WDTC1Q8N5D0 677 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 ST13P5Q8NFI4 369 aaPredicted RBP9.78□□□□□ -0.84
PDGFC-202ENST00000422544 EPS8L1Q8TE68 723 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 SLC20A1Q8WUM9 679 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 DDX1Q92499 740 aaKnown RBP9.78□□□□□ -0.84
PDGFC-202ENST00000422544 FGF13Q92913 245 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 MCRS1Q96EZ8 462 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 TRMT2BQ96GJ1 504 aaKnown RBP9.78□□□□□ -0.84
PDGFC-202ENST00000422544 ZSWIM3Q96MP5 696 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 TTLL2Q9BWV7 592 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 EDEM3Q9BZQ6 932 aa9.78□□□□□ -0.84
PDGFC-202ENST00000422544 PDCL3Q9H2J4 239 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms