RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 BDNFP23560 247 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 PSEN1P49768 467 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 TMPRSS15P98073 1019 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 TTLL9Q3SXZ7 439 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 RABEP2Q9H5N1 569 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 ATP5C1P36542 298 aaKnown RBP11.16□□□□□ -0.62
PTCH1-206ENST00000421141 FDFT1P37268 417 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 PHKG1Q16816 387 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 AARS2Q5JTZ9 985 aaKnown RBP11.16□□□□□ -0.62
PTCH1-206ENST00000421141 PPP2R2DQ66LE6 453 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 SLC47A2Q86VL8 602 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 KIAA0319LQ8IZA0 1049 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 ATXN7L3BQ96GX2 97 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 OSBPL8Q9BZF1 889 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 FAM96AQ9H5X1 160 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 DNMT3LQ9UJW3 386 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 ASTN2O75129 1339 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-206ENST00000421141 PHF2O75151 1096 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 OR1E1P30953 314 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 SCNN1GP51170 649 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 FPGSQ05932 587 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 LBRQ14739 615 aaKnown RBP11.16□□□□□ -0.62
PTCH1-206ENST00000421141 SV2AQ7L0J3 742 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 PSMD10O75832 226 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 MICAL2O94851 1124 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 EPC2Q52LR7 807 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 OLFML2BQ68BL8 750 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 WDR75Q8IWA0 830 aaKnown RBP11.16□□□□□ -0.62
PTCH1-206ENST00000421141 FAM105AQ9NUU6 356 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 ECM29Q5VYK3 1845 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 FOXN3O00409 490 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-206ENST00000421141 ATMINO43313 823 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-206ENST00000421141 KLK7P49862 253 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 PLPP4Q5VZY2 271 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 SLC24A5Q71RS6 500 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 LRP10Q7Z4F1 713 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 TTC17Q96AE7 1141 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 TRIM15Q9C019 465 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 C20orf96Q9NUD7 363 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-206ENST00000421141 TBC1D3BA6NDS4 549 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 CBX4O00257 560 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 DDHD2O94830 711 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 CCDC130P13994 396 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 RBM23Q86U06 439 aaKnown RBP11.15□□□□□ -0.62
PTCH1-206ENST00000421141 FAM172AQ8WUF8 416 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 SLC13A1Q9BZW2 595 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 SPG21Q9NZD8 308 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 USH1CQ9Y6N9 552 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 ZNF263O14978 683 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 CCL5P13501 91 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 TSNAXIP1Q2TAA8 658 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 TAS1R2Q8TE23 839 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 LZICQ8WZA0 190 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 TUBB6Q9BUF5 446 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 STK38LQ9Y2H1 464 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 PAEPP09466 180 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 POLR2LP62875 67 aaKnown RBP11.15□□□□□ -0.62
PTCH1-206ENST00000421141 GJB7Q6PEY0 223 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 PSRC1Q6PGN9 363 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-206ENST00000421141 ABCC13Q9NSE7 274 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 CDH9Q9ULB4 789 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 C4AP0C0L4 1744 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 ACO2Q99798 780 aaKnown RBP11.15□□□□□ -0.62
PTCH1-206ENST00000421141 ADGRG1Q9Y653 693 aa11.15□□□□□ -0.62
PTCH1-206ENST00000421141 GPR25O00155 361 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 SMAPO00193 183 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 CST8O60676 142 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 PMPCBO75439 489 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 GLUD1P00367 558 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 TMEM253P0C7T8 217 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 PMS2P54278 862 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 MAP4K3Q8IVH8 894 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 CHP1Q99653 195 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 EFHD1Q9BUP0 239 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 ZCCHC17Q9NP64 241 aaKnown RBP11.15□□□□□ -0.63
PTCH1-206ENST00000421141 STX7O15400 261 aaKnown RBP11.15□□□□□ -0.63
PTCH1-206ENST00000421141 NCK2O43639 380 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 ACAT1P24752 427 aaKnown RBP11.15□□□□□ -0.63
PTCH1-206ENST00000421141 RHOAP61586 193 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 CTU1Q7Z7A3 348 aaKnown RBP11.15□□□□□ -0.63
PTCH1-206ENST00000421141 SERPINI1Q99574 410 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 PCDHGB4Q9UN71 923 aa11.15□□□□□ -0.63
PTCH1-206ENST00000421141 AKAP3O75969 853 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 SGPL1O95470 568 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 CAPRIN1Q14444 709 aaKnown RBP11.14□□□□□ -0.63
PTCH1-206ENST00000421141 RUBCNQ92622 972 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 PPP1R16AQ96I34 528 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 COMTP21964 271 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 GLRA2P23416 452 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 ZKSCAN8Q15776 578 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-206ENST00000421141 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-206ENST00000421141 SLC2A14Q8TDB8 520 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 SPATA17Q96L03 361 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 CRTAMO95727 393 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 USP17L7P0C7H9 530 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 HMOX2P30519 316 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 FSCBQ5H9T9 825 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 BLOC1S5Q8TDH9 187 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 PPWD1Q96BP3 646 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms