RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 HOXC10Q9NYD6 342 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 MAGED2Q9UNF1 606 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-202ENST00000418310 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-202ENST00000418310 COL11A1P12107 1806 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-202ENST00000418310 FAM237BA0A1B0GVD1 139 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 CYB561D2O14569 222 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 F7P08709 466 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-202ENST00000418310 KRT7P08729 469 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 IQCF3P0C7M6 154 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 YWHAEP62258 255 aaKnown RBP12.43□□□□□ -0.42
LIMK1-202ENST00000418310 ROR1Q01973 937 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 DPYSL3Q14195 570 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 CCDC6Q16204 474 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 JADE1Q6IE81 842 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 ZCCHC23Q6ZST2 131 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 CDHR3Q6ZTQ4 885 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 BZW1Q7L1Q6 419 aaKnown RBP12.43□□□□□ -0.42
LIMK1-202ENST00000418310 XYLT1Q86Y38 959 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 SLC17A6Q9P2U8 582 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 CPSF3Q9UKF6 684 aaKnown RBP12.43□□□□□ -0.42
LIMK1-202ENST00000418310 DRG1Q9Y295 367 aaKnown RBP12.43□□□□□ -0.42
LIMK1-202ENST00000418310 SYNJ2BP-COX16A0A087WUM0 186 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 TRIM49D1C9J1S8 452 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 E5RJQ4 531 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 FAM189A1O60320 539 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 ATXN1P54253 815 aaKnown RBP12.42□□□□□ -0.42
LIMK1-202ENST00000418310 DSTYKQ6XUX3 929 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 EP400NLQ6ZTU2 488 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 ALYREFQ86V81 257 aaKnown RBP12.42□□□□□ -0.42
LIMK1-202ENST00000418310 DCAKDQ8WVC6 231 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 RXFP2Q8WXD0 754 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 SPDL1Q96EA4 605 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 SPATA33Q96N06 139 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 CEP41Q9BYV8 373 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 COX16Q9P0S2 106 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 KANSL3Q9P2N6 904 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 SIX4Q9UIU6 781 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 CNTN6Q9UQ52 1028 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 SNCAIPQ9Y6H5 919 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.42□□□□□ -0.42
LIMK1-202ENST00000418310 SIGLEC16A6NMB1 481 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 LACTBL1A8MY62 500 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 CXorf49A8MYA2 514 aaPredicted RBP12.42□□□□□ -0.42
LIMK1-202ENST00000418310 GPR25O00155 361 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 MAFO75444 373 aaPredicted RBP12.42□□□□□ -0.42
LIMK1-202ENST00000418310 LSM8O95777 96 aaKnown RBP12.42□□□□□ -0.42
LIMK1-202ENST00000418310 PIGRP01833 764 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 VTNP04004 478 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 EIF4BP23588 611 aaKnown RBP12.42□□□□□ -0.42
LIMK1-202ENST00000418310 ARFIP2P53365 341 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 PTPN11Q06124 597 aaPredicted RBP12.42□□□□□ -0.42
LIMK1-202ENST00000418310 EFCAB12Q6NXP0 572 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 BBS12Q6ZW61 710 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 CLNKQ7Z7G1 428 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 ARMC2Q8NEN0 867 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 ACAP3Q96P50 834 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 MIPEPQ99797 713 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 TMEM120AQ9BXJ8 343 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 CDT1Q9H211 546 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 ACSS3Q9H6R3 686 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 SLC24A2Q9UI40 661 aa12.42□□□□□ -0.42
LIMK1-202ENST00000418310 HCRTO43612 131 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 PEX11AO75192 247 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 HAUS5O94927 633 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 RBL1P28749 1068 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 CRADDP78560 199 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 ACVR2BQ13705 512 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 CEP128Q6ZU80 1094 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 MOB2Q70IA6 237 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 RELL1Q8IUW5 271 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 UBR7Q8N806 425 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 C7orf31Q8N865 590 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 SLC4A11Q8NBS3 891 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 OTUD5Q96G74 571 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 TRIM55Q9BYV6 548 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 PDGFCQ9NRA1 345 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 STRIP2Q9ULQ0 834 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 HMGCRP04035 888 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 MYL2P10916 166 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 GMPRP36959 345 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 ZNF200P98182 395 aaPredicted RBP12.41□□□□□ -0.42
LIMK1-202ENST00000418310 CA9Q16790 459 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 KLHL38Q2WGJ6 581 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 MROH9Q5TGP6 573 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 LRRC38Q5VT99 294 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 TRNP1Q6NT89 227 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 MPZL3Q6UWV2 235 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 VPS52Q8N1B4 723 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 MCUR1Q96AQ8 359 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 PGLYRP2Q96PD5 576 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 B3GNT5Q9BYG0 378 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 FOXP3Q9BZS1 431 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 LRMDAQ9H2I8 198 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 PCMTD2Q9NV79 361 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 AKT3Q9Y243 479 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 WDR81Q562E7 1941 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 FER1L6Q2WGJ9 1857 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 ZWINTO95229 277 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 ALADP13716 330 aa12.41□□□□□ -0.42
LIMK1-202ENST00000418310 RFC5P40937 340 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms