RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 PAPPAQ13219 1627 aa13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 E5RJQ4 531 aa13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 NVLO15381 856 aaKnown RBP13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 ATP9BO43861 1147 aa13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 EDF1O60869 148 aaKnown RBP13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 LMNB2Q03252 620 aa13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 ZNF252P-AS1Q0IIN9 211 aa13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 ZNF268Q14587 947 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 PNPLA1Q8N8W4 532 aa13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 RNF169Q8NCN4 708 aa13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 SMC1BQ8NDV3 1235 aa13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 MORC4Q8TE76 937 aa13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 SCG3Q8WXD2 468 aaKnown RBP13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 SGF29Q96ES7 293 aa13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 ANKRD36BP1Q96IX9 119 aa13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 PRM3Q9NNZ6 103 aa13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 CACNG4Q9UBN1 327 aa13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 ATXN2Q99700 1313 aaKnown RBP13.77□□□□□ -0.21
TNFRSF8-203ENST00000417814 hCG_1818297A0A087WSY0 165 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 LRCH4O75427 683 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 OATP04181 439 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 HSD17B4P51659 736 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 RASA2Q15283 850 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 CCDC142Q17RM4 750 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 RHBDF2Q6PJF5 856 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 DENND5BQ6ZUT9 1274 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 CCNJLQ8IV13 435 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 PIP4K2CQ8TBX8 421 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 NLRP7Q8WX94 980 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 FAM81BQ96LP2 452 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 TSC22D3Q99576 134 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 RPF1Q9H9Y2 349 aaKnown RBP13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 NRBP2Q9NSY0 501 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 ANKEF1Q9NU02 776 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 ZNF358Q9NW07 568 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 STK32BQ9NY57 414 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 USP18Q9UMW8 372 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 AFG3L2Q9Y4W6 797 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 TCRBV9S1A1TA0A576 114 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 TMEM191CA6NGB0 347 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 ABL2P42684 1182 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 CENPCQ03188 943 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 MFSD5Q6N075 450 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 CRELD2Q6UXH1 353 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 CLNKQ7Z7G1 428 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 FAM131BQ86XD5 332 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 SPATA6LQ8N4H0 392 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 ALLCQ8N6M5 410 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 FAM136AQ96C01 138 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 EBF4Q9BQW3 602 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 ZNRF3Q9ULT6 936 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 CLUHO75153 1309 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 GSTA1P08263 222 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 SERPINB4P48594 390 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 AP1B1Q10567 949 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 CYP1B1Q16678 543 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 PCGF5Q86SE9 256 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 TNS4Q8IZW8 715 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 TMC2Q8TDI7 906 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 MARK4Q96L34 752 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 SRPK1Q96SB4 655 aaKnown RBP13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 CADM1Q9BY67 442 aaKnown RBP13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 RNPEPL1Q9HAU8 725 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 MFHAS1Q9Y4C4 1052 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 ANKRD12Q6UB98 2062 aa13.76□□□□□ -0.21
TNFRSF8-203ENST00000417814 CIB2O75838 187 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 CALB1P05937 261 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 GNAT1P11488 350 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 CALB2P22676 271 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 GLRBP48167 497 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 CAV1Q03135 178 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 C6orf163Q5TEZ5 329 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 EMC10Q5UCC4 262 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 PTAR1Q7Z6K3 402 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 SDCCAG8Q86SQ7 713 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 PPIL6Q8IXY8 311 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 MPP5Q8N3R9 675 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 SNX31Q8N9S9 440 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 C3orf20Q8ND61 904 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 USP33Q8TEY7 942 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 SPATA33Q96N06 139 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 NIF3L1Q9GZT8 377 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 ARHGEF3Q9NR81 526 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 CYTH4Q9UIA0 394 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 KCNK1O00180 336 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 MAP3K13O43283 966 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 SNUPNO95149 360 aaKnown RBP13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 ERBB2P04626 1255 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 ATP4AP20648 1035 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 KCNA3P22001 575 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 MMP8P22894 467 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 NFIL3Q16649 462 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 PPM1JQ5JR12 505 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 CTU1Q7Z7A3 348 aaKnown RBP13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 DNAAF3Q8N9W5 541 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 ZNF280CQ8ND82 737 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 STK32AQ8WU08 396 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 ACAD9Q9H845 621 aa13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 FNDC3AQ9Y2H6 1198 aaKnown RBP13.75□□□□□ -0.21
TNFRSF8-203ENST00000417814 A0A0B4J269 797 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms