RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 INTS13Q9NVM9 706 aa17.44■□□□□ 0.38
PRPF18-203ENST00000417658 TBC1D7Q9P0N9 293 aa17.44■□□□□ 0.38
PRPF18-203ENST00000417658 HELZP42694 1942 aaKnown RBP17.44■□□□□ 0.38
PRPF18-203ENST00000417658 ASPMQ8IZT6 3477 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 GOLGA8IPA6NC78 632 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 GOLGA8JA6NMD2 632 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 SGK1O00141 431 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 TRIM66O15016 1216 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 KIAA0391O15091 583 aaKnown RBP17.43■□□□□ 0.38
PRPF18-203ENST00000417658 KLF8O95600 359 aaPredicted RBP17.43■□□□□ 0.38
PRPF18-203ENST00000417658 WARSP23381 471 aaKnown RBP17.43■□□□□ 0.38
PRPF18-203ENST00000417658 PTGER3P43115 390 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 KIR2DL1P43626 348 aaPredicted RBP17.43■□□□□ 0.38
PRPF18-203ENST00000417658 SLC6A11P48066 632 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 COL9A2Q14055 689 aaPredicted RBP17.43■□□□□ 0.38
PRPF18-203ENST00000417658 SURF1Q15526 300 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 MAP7D1Q3KQU3 841 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 LARP1BQ659C4 914 aaKnown RBP17.43■□□□□ 0.38
PRPF18-203ENST00000417658 USP49Q70CQ1 688 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 PIP4P1Q86T03 277 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 DDX42Q86XP3 938 aaKnown RBP eCLIP17.43■□□□□ 0.38
PRPF18-203ENST00000417658 TMEFF1Q8IYR6 380 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 MYCBPAPQ8TBZ2 947 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 KCNV2Q8TDN2 545 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 C8orf48Q96LL4 319 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 CBWD1Q9BRT8 395 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 TBC1D14Q9P2M4 693 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 MBD1Q9UIS9 605 aaPredicted RBP17.43■□□□□ 0.38
PRPF18-203ENST00000417658 MSRB2Q9Y3D2 182 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 SPEGQ15772 3267 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 CACNA1EQ15878 2313 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 PKD1L2Q7Z442 2459 aa17.43■□□□□ 0.38
PRPF18-203ENST00000417658 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.42■□□□□ 0.38
PRPF18-203ENST00000417658 ADH1CP00326 375 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 OAS1P00973 400 aaKnown RBP17.42■□□□□ 0.38
PRPF18-203ENST00000417658 FAM163BP0C2L3 166 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 ENGP17813 658 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 TIE1P35590 1138 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 CASP5P51878 434 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 PSMC1P62191 440 aaKnown RBP17.42■□□□□ 0.38
PRPF18-203ENST00000417658 CYP27A1Q02318 531 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 RESTQ13127 1097 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 SEMA3BQ13214 749 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 DUOXA2Q1HG44 320 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 PEAR1Q5VY43 1037 aaPredicted RBP17.42■□□□□ 0.38
PRPF18-203ENST00000417658 RRAGBQ5VZM2 374 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 SFTPA1Q8IWL2 248 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 GPD1LQ8N335 351 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 CEP76Q8TAP6 659 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 PCED1BQ96HM7 432 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 FAM84AQ96KN4 292 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 BCCIPQ9P287 314 aaKnown RBP eCLIP17.42■□□□□ 0.38
PRPF18-203ENST00000417658 PILRBQ9UKJ0 227 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 SMC3Q9UQE7 1217 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 CPQQ9Y646 472 aa17.42■□□□□ 0.38
PRPF18-203ENST00000417658 MYO18AQ92614 2054 aaKnown RBP17.41■□□□□ 0.38
PRPF18-203ENST00000417658 FRMD3A2A2Y4 597 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 ADAM23O75077 832 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 TNNC2P02585 160 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 PDGFRBP09619 1106 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 MAPK8P45983 427 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 MESP2Q0VG99 397 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 EMC10Q5UCC4 262 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 TDRD10Q5VZ19 366 aaKnown RBP17.41■□□□□ 0.38
PRPF18-203ENST00000417658 LYSMD4Q5XG99 296 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 FRMD1Q8N878 549 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 OR5B17Q8NGF7 314 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 HMGB4Q8WW32 186 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 ZCCHC14Q8WYQ9 949 aaKnown RBP17.41■□□□□ 0.38
PRPF18-203ENST00000417658 OTUB2Q96DC9 234 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 PCIF1Q9H4Z3 704 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 ARHGEF4Q9NR80 690 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 SMPD4Q9NXE4 827 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 CFAP97Q9P2B7 532 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 CIZ1Q9ULV3 898 aaPredicted RBP17.41■□□□□ 0.38
PRPF18-203ENST00000417658 SLC6A14Q9UN76 642 aa17.41■□□□□ 0.38
PRPF18-203ENST00000417658 AKAP13Q12802 2813 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 MYOFQ9NZM1 2061 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 E2F8A0AVK6 867 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 FAM221BA6H8Z2 402 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 ZNF233A6NK53 670 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 F8VP50 259 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 H0Y626 953 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 HYAL3O43820 417 aaPredicted RBP17.4■□□□□ 0.38
PRPF18-203ENST00000417658 TRIM16O95361 564 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 ABL1P00519 1130 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 ADH5P11766 374 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 RDXP35241 583 aaKnown RBP17.4■□□□□ 0.38
PRPF18-203ENST00000417658 GNL1P36915 607 aaPredicted RBP17.4■□□□□ 0.38
PRPF18-203ENST00000417658 SIM1P81133 766 aaPredicted RBP17.4■□□□□ 0.38
PRPF18-203ENST00000417658 TAF10Q12962 218 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 DUOXA1Q1HG43 343 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 PREPLQ4J6C6 727 aaPredicted RBP17.4■□□□□ 0.38
PRPF18-203ENST00000417658 LRSAM1Q6UWE0 723 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 ARMCX6Q7L4S7 300 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 SLITRK1Q96PX8 696 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 MMS19Q96T76 1030 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.4■□□□□ 0.38
PRPF18-203ENST00000417658 SRPRBQ9Y5M8 271 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms