RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 M0QYV0 167 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 TNFRSF10AO00220 468 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 RTN3O95197 1032 aaPredicted RBP13.19□□□□□ -0.3
SKA1-203ENST00000417656 UCHL3P15374 230 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 RFX1P22670 979 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 FCARP24071 287 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 BCAT1P54687 386 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 FAM78AQ5JUQ0 283 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 PARM1Q6UWI2 310 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 MTSS1LQ765P7 747 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 ZSCAN18Q8TBC5 510 aaPredicted RBP13.19□□□□□ -0.3
SKA1-203ENST00000417656 MRPS31Q92665 395 aaKnown RBP13.19□□□□□ -0.3
SKA1-203ENST00000417656 FBXO32Q969P5 355 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 PCMTD1Q96MG8 357 aaPredicted RBP13.19□□□□□ -0.3
SKA1-203ENST00000417656 ASB16Q96NS5 453 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 KXD1Q9BQD3 176 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 NAA15Q9BXJ9 866 aaKnown RBP13.19□□□□□ -0.3
SKA1-203ENST00000417656 GPR88Q9GZN0 384 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 SMOC2Q9H3U7 446 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 KCNK12Q9HB15 430 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 TRPC7Q9HCX4 862 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 PLCB1Q9NQ66 1216 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 EHD2Q9NZN4 543 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 HESX1Q9UBX0 185 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 A0A0C4DFX4 3053 aa13.19□□□□□ -0.3
SKA1-203ENST00000417656 LRRC10BA6NIK2 292 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 TULP2O00295 520 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 CYP26A1O43174 497 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 TEX33O43247 280 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 THAP12O43422 761 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 PRAMEF12O95522 483 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 YWHAQP27348 245 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 GNA15P30679 374 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 PDE4CQ08493 712 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 BST2Q10589 180 aaKnown RBP13.18□□□□□ -0.3
SKA1-203ENST00000417656 TAF10Q12962 218 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 DRAP1Q14919 205 aaPredicted RBP13.18□□□□□ -0.3
SKA1-203ENST00000417656 TXNDC8Q6A555 127 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 LCLAT1Q6UWP7 414 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 PIGZQ86VD9 579 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 MAB21L3Q8N8X9 362 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 ANKRD52Q8NB46 1076 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 UBA3Q8TBC4 463 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 SMARCD2Q92925 531 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 SLITRK1Q96PX8 696 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 ERGIC2Q96RQ1 377 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 RPP25Q9BUL9 199 aaKnown RBP13.18□□□□□ -0.3
SKA1-203ENST00000417656 TASP1Q9H6P5 420 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 PNPLA8Q9NP80 782 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 RTN4Q9NQC3 1192 aaKnown RBP13.18□□□□□ -0.3
SKA1-203ENST00000417656 GMIPQ9P107 970 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 IGSF9Q9P2J2 1179 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 KIAA1257Q9ULG3 409 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 KIF26AQ9ULI4 1882 aaPredicted RBP13.18□□□□□ -0.3
SKA1-203ENST00000417656 NCOR1O75376 2440 aa13.18□□□□□ -0.3
SKA1-203ENST00000417656 A0A1B0GTH6 734 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 C2orf78A6NCI8 922 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 F8VZ95 297 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 FOXN3O00409 490 aaPredicted RBP13.17□□□□□ -0.3
SKA1-203ENST00000417656 XPO1O14980 1071 aaKnown RBP13.17□□□□□ -0.3
SKA1-203ENST00000417656 DCXO43602 365 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 SERPINC1P01008 464 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 SETSIPP0DME0 302 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 DDX6P26196 483 aaKnown RBP eCLIP13.17□□□□□ -0.3
SKA1-203ENST00000417656 VIPR2P41587 438 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 SLC8A3P57103 927 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 ZNF445P59923 1031 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 POLR2FP61218 127 aaKnown RBP13.17□□□□□ -0.3
SKA1-203ENST00000417656 FANCCQ00597 558 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 STILQ15468 1287 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 FILIP1LQ4L180 1135 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 PKDCCQ504Y2 493 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 TANGO2Q6ICL3 276 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 GPIHBP1Q8IV16 184 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 RNF214Q8ND24 703 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 NEK11Q8NG66 645 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 SECISBP2LQ93073 1101 aaKnown RBP13.17□□□□□ -0.3
SKA1-203ENST00000417656 RSPRY1Q96DX4 576 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 NAP1L5Q96NT1 182 aaPredicted RBP13.17□□□□□ -0.3
SKA1-203ENST00000417656 SLC46A2Q9BY10 475 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 SMG9Q9H0W8 520 aaKnown RBP13.17□□□□□ -0.3
SKA1-203ENST00000417656 NLRC4Q9NPP4 1024 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 IL37Q9NZH6 218 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 TRPM5Q9NZQ8 1165 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 SORCS3Q9UPU3 1222 aa13.17□□□□□ -0.3
SKA1-203ENST00000417656 COL4A2P08572 1712 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 BDP1A6H8Y1 2624 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 FAM92AA1XBS5 289 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 ZNF840PA6NDX5 716 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 DLL1O00548 723 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 NARSO43776 548 aaKnown RBP13.16□□□□□ -0.3
SKA1-203ENST00000417656 ECI2O75521 394 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 ABL1P00519 1130 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 CFHP08603 1231 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 PLA2G4AP47712 749 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 RGS7P49802 495 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 KIF11P52732 1056 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 TDGQ13569 410 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 GRM2Q14416 872 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 CNGA2Q16280 664 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms