RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 RAB41Q5JT25 222 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 TMEM184AQ6ZMB5 413 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 MMS22LQ6ZRQ5 1243 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 DENND5BQ6ZUT9 1274 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 RTL10Q7L3V2 364 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 PHF13Q86YI8 300 aaPredicted RBP13.69□□□□□ -0.22
SEC22C-205ENST00000417572 MICALL1Q8N3F8 863 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 SCAMP5Q8TAC9 235 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 GUCD1Q96NT3 240 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 ISCUQ9H1K1 167 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 KCNF1Q9H3M0 494 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 LRRC4Q9HBW1 653 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 ATG2AQ2TAZ0 1938 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 PLXNA3P51805 1871 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 EIF3CLB5ME19 914 aaKnown RBP13.69□□□□□ -0.22
SEC22C-205ENST00000417572 E5RJQ4 531 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 CCL16O15467 120 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 ERBB2P04626 1255 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 MMP8P22894 467 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 ACADSBP45954 432 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 GABRB2P47870 512 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 TKTL1P51854 596 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 USP46P62068 366 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 IFRD2Q12894 506 aaPredicted RBP13.69□□□□□ -0.22
SEC22C-205ENST00000417572 PTP4A2Q12974 167 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 PLD1Q13393 1074 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 DNAJB7Q7Z6W7 309 aaPredicted RBP13.69□□□□□ -0.22
SEC22C-205ENST00000417572 SCUBE3Q8IX30 993 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 MCOLN2Q8IZK6 566 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 C12orf76Q8N812 135 aaPredicted RBP13.69□□□□□ -0.22
SEC22C-205ENST00000417572 CASP10Q92851 521 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 C18orf8Q96DM3 657 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 CEP295NLQ96MC4 621 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 EIF3CQ99613 913 aaKnown RBP13.69□□□□□ -0.22
SEC22C-205ENST00000417572 C11orf70Q9BRQ4 267 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 SYNCQ9H7C4 482 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 CYLDQ9NQC7 956 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 MTMR10Q9NXD2 777 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 ADAM22Q9P0K1 906 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 MAGED2Q9UNF1 606 aaPredicted RBP13.69□□□□□ -0.22
SEC22C-205ENST00000417572 USP3Q9Y6I4 520 aa13.69□□□□□ -0.22
SEC22C-205ENST00000417572 CCDC195A0A1B0GUA6 201 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 ARHGAP6O43182 974 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 NRDCO43847 1150 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 LCA5LO95447 670 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 CSH1P0DML2 217 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 CSH2P0DML3 217 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 HMGA1P17096 107 aaKnown RBP13.68□□□□□ -0.22
SEC22C-205ENST00000417572 HOXA9P31269 272 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 ADIGQ0VDE8 80 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 VEPH1Q14D04 833 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 CYP4A22Q5TCH4 519 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 ELMSAN1Q6PJG2 1045 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 MON1BQ7L1V2 547 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 PHLDB2Q86SQ0 1253 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 FEZF2Q8TBJ5 459 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 NDRG1Q92597 394 aaKnown RBP13.68□□□□□ -0.22
SEC22C-205ENST00000417572 ZNF512Q96ME7 567 aaPredicted RBP13.68□□□□□ -0.22
SEC22C-205ENST00000417572 ULBP1Q9BZM6 244 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 MIS12Q9H081 205 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 ZDHHC7Q9NXF8 308 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 IL37Q9NZH6 218 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 ASB3Q9Y575 518 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 PTPRDP23468 1912 aa13.68□□□□□ -0.22
SEC22C-205ENST00000417572 MYO7AQ13402 2215 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 PAPSS1O43252 624 aaPredicted RBP13.67□□□□□ -0.22
SEC22C-205ENST00000417572 RTN3O95197 1032 aaPredicted RBP13.67□□□□□ -0.22
SEC22C-205ENST00000417572 ZBED1O96006 694 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 HNRNPA1P09651 372 aaKnown RBP eCLIP13.67□□□□□ -0.22
SEC22C-205ENST00000417572 USP17L7P0C7H9 530 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 YWHAQP27348 245 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 MAGEA1P43355 309 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 GALCP54803 685 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 SNX16P57768 344 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
SEC22C-205ENST00000417572 SPA17Q15506 151 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 TAF12Q16514 161 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 CTC1Q2NKJ3 1217 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 OR6B2Q6IFH4 312 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 PPP1R2P3Q6NXS1 205 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 ITIH5Q86UX2 942 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 SIX6OS1Q8N1H7 587 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 MSANTD4Q8NCY6 345 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 IPO4Q8TEX9 1081 aaKnown RBP13.67□□□□□ -0.22
SEC22C-205ENST00000417572 CLEC4CQ8WTT0 213 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 PSMG2Q969U7 264 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 PACSIN1Q9BY11 444 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 PRKD2Q9BZL6 878 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 FBXO44Q9H4M3 255 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 DZANK1Q9NVP4 752 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 COMMD8Q9NX08 183 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 REXO2Q9Y3B8 237 aaKnown RBP13.67□□□□□ -0.22
SEC22C-205ENST00000417572 PCDHA13Q9Y5I0 950 aa13.67□□□□□ -0.22
SEC22C-205ENST00000417572 NCK2O43639 380 aa13.66□□□□□ -0.22
SEC22C-205ENST00000417572 CALB1P05937 261 aa13.66□□□□□ -0.22
SEC22C-205ENST00000417572 SRGAP2BP0DMP2 458 aa13.66□□□□□ -0.22
SEC22C-205ENST00000417572 ABCB4P21439 1286 aa13.66□□□□□ -0.22
SEC22C-205ENST00000417572 MRPS5P82675 430 aaKnown RBP13.66□□□□□ -0.22
SEC22C-205ENST00000417572 TAF10Q12962 218 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms