RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 KIF11P52732 1056 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 SLC5A3P53794 718 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 ADIGQ0VDE8 80 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 PDCLQ13371 301 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 CLEC16AQ2KHT3 1053 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 ARHGAP15Q53QZ3 475 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 CCDC122Q5T0U0 273 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 CYP4A22Q5TCH4 519 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 E4F1Q66K89 784 aaPredicted RBP8.92□□□□□ -0.98
TRIM48-201ENST00000417545 OR6B2Q6IFH4 312 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 LILRA6Q6PI73 481 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 TMC5Q6UXY8 1006 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 TOGARAM2Q6ZUX3 1019 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 PDZD4Q76G19 769 aaPredicted RBP8.92□□□□□ -0.98
TRIM48-201ENST00000417545 PIGZQ86VD9 579 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 PDZD8Q8NEN9 1154 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 CPA5Q8WXQ8 436 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 TRIM44Q96DX7 344 aaPredicted RBP8.92□□□□□ -0.98
TRIM48-201ENST00000417545 SPATA17Q96L03 361 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 CEP295NLQ96MC4 621 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 KCNK16Q96T55 309 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 CORO1BQ9BR76 489 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 C11orf70Q9BRQ4 267 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 NACA2Q9H009 215 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 PNPLA8Q9NP80 782 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 ADAM22Q9P0K1 906 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 ARHGAP20Q9P2F6 1191 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 ADAMTS1Q9UHI8 967 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 STRIP2Q9ULQ0 834 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 GOLGA8SH3BPF8 625 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 CAPN9O14815 690 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 LINC01565O15544 149 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 SART1O43290 800 aaKnown RBP8.91□□□□□ -0.98
TRIM48-201ENST00000417545 RTN2O75298 545 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 RFPL2O75678 378 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 BEST1O76090 585 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 FBXO21O94952 628 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 CFHP08603 1231 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 HOXB8P17481 243 aaPredicted RBP8.91□□□□□ -0.98
TRIM48-201ENST00000417545 PTPN2P17706 415 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 ATF6P18850 670 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 POU3F3P20264 500 aaPredicted RBP8.91□□□□□ -0.98
TRIM48-201ENST00000417545 YWHAQP27348 245 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 GPD2P43304 727 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 CACNA2D1P54289 1103 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 NOMO3P69849 1222 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 CDK17Q00537 523 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 ARID5BQ14865 1188 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 CLUL1Q15846 466 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 PABPC1LQ4VXU2 614 aaKnown RBP8.91□□□□□ -0.98
TRIM48-201ENST00000417545 HGSNATQ68CP4 663 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 ACAD10Q6JQN1 1059 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 ANKRD54Q6NXT1 300 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 MMS22LQ6ZRQ5 1243 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 PAQR9Q6ZVX9 377 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 RSRC2Q7L4I2 434 aaKnown RBP8.91□□□□□ -0.98
TRIM48-201ENST00000417545 KIAA1328Q86T90 577 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 CCDC170Q8IYT3 715 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 ARHGAP18Q8N392 663 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 PLCD3Q8N3E9 789 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 C12orf76Q8N812 135 aaPredicted RBP8.91□□□□□ -0.98
TRIM48-201ENST00000417545 STKLD1Q8NE28 680 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 SLC30A5Q8TAD4 765 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 CTNNBL1Q8WYA6 563 aaPredicted RBP8.91□□□□□ -0.98
TRIM48-201ENST00000417545 DDX1Q92499 740 aaKnown RBP8.91□□□□□ -0.98
TRIM48-201ENST00000417545 FAM149B1Q96BN6 582 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 ZNF653Q96CK0 615 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 C18orf8Q96DM3 657 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 PABPC5Q96DU9 382 aaKnown RBP8.91□□□□□ -0.98
TRIM48-201ENST00000417545 HSFY1Q96LI6 401 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 RIPOR3Q96MK2 946 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 ZSWIM1Q9BR11 485 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 TRIM62Q9BVG3 475 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 SELENOOQ9BVL4 669 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 PRKD2Q9BZL6 878 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 UBXN6Q9BZV1 441 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 CRISPLD1Q9H336 500 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 SLITRK6Q9H5Y7 841 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 CSNK1G1Q9HCP0 422 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 CYLDQ9NQC7 956 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 SPTLC3Q9NUV7 552 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 COMMD8Q9NX08 183 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 TRPM5Q9NZQ8 1165 aa8.91□□□□□ -0.98
TRIM48-201ENST00000417545 SOWAHDA6NJG2 315 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 E5RJQ4 531 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 TULP2O00295 520 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 ZNF197O14709 1029 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 VNN2O95498 520 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 ZBED1O96006 694 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 RALAP11233 206 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 CHRNB2P17787 502 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 ABCB4P21439 1286 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 GABRR2P28476 465 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 CDC25CP30307 473 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 MTHFRP42898 656 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 KRT83P78385 493 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 RBM10P98175 930 aaKnown RBP8.9□□□□□ -0.98
TRIM48-201ENST00000417545 CENPCQ03188 943 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 ITIH3Q06033 890 aa8.9□□□□□ -0.98
TRIM48-201ENST00000417545 GFPT1Q06210 699 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms