RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 CDH8P55286 799 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 ARHGAP8P85298 464 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 DPYDQ12882 1025 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 TAF10Q12962 218 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 CEP135Q66GS9 1140 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 KRBA2Q6ZNG9 492 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 UNC93AQ86WB7 457 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 DDX42Q86XP3 938 aaKnown RBP eCLIP19.58■□□□□ 0.72
VPS16-204ENST00000417508 CRYBG2Q8N1P7 616 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 GUF1Q8N442 669 aaKnown RBP19.58■□□□□ 0.72
VPS16-204ENST00000417508 CAMKK1Q8N5S9 505 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 CD101Q93033 1021 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 RMDN1Q96DB5 314 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 SMYD3Q9H7B4 428 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 SLC8A2Q9UPR5 921 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 WNT6Q9Y6F9 365 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 HELZP42694 1942 aaKnown RBP19.58■□□□□ 0.72
VPS16-204ENST00000417508 CACNA1AO00555 2505 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 LEFTY2O00292 366 aa19.57■□□□□ 0.72
VPS16-204ENST00000417508 CLDN5O00501 218 aa19.57■□□□□ 0.72
VPS16-204ENST00000417508 CLSTN1O94985 981 aa19.57■□□□□ 0.72
VPS16-204ENST00000417508 ZNF202O95125 648 aa19.57■□□□□ 0.72
VPS16-204ENST00000417508 OLFM2O95897 454 aa19.57■□□□□ 0.72
VPS16-204ENST00000417508 OAS1P00973 400 aaKnown RBP19.57■□□□□ 0.72
VPS16-204ENST00000417508 VAMP7P51809 220 aa19.57■□□□□ 0.72
VPS16-204ENST00000417508 DLG4P78352 724 aa19.57■□□□□ 0.72
VPS16-204ENST00000417508 INTS8Q75QN2 995 aaKnown RBP19.57■□□□□ 0.72
VPS16-204ENST00000417508 SMARCD1Q96GM5 515 aa19.57■□□□□ 0.72
VPS16-204ENST00000417508 MED10Q9BTT4 135 aa19.57■□□□□ 0.72
VPS16-204ENST00000417508 RNF38Q9H0F5 515 aa19.57■□□□□ 0.72
VPS16-204ENST00000417508 LINC00597Q9H2U6 94 aa19.57■□□□□ 0.72
VPS16-204ENST00000417508 DLL3Q9NYJ7 618 aa19.57■□□□□ 0.72
VPS16-204ENST00000417508 IL37Q9NZH6 218 aa19.57■□□□□ 0.72
VPS16-204ENST00000417508 RALGAPA1Q6GYQ0 2036 aa19.56■□□□□ 0.72
VPS16-204ENST00000417508 ABL1P00519 1130 aa19.56■□□□□ 0.72
VPS16-204ENST00000417508 ASS1P00966 412 aaKnown RBP19.56■□□□□ 0.72
VPS16-204ENST00000417508 EGFP01133 1207 aa19.56■□□□□ 0.72
VPS16-204ENST00000417508 CACNA2D1P54289 1103 aa19.56■□□□□ 0.72
VPS16-204ENST00000417508 LMNB2Q03252 620 aa19.56■□□□□ 0.72
VPS16-204ENST00000417508 DMWDQ09019 674 aa19.56■□□□□ 0.72
VPS16-204ENST00000417508 SNX30Q5VWJ9 437 aa19.56■□□□□ 0.72
VPS16-204ENST00000417508 PRR23BQ6ZRT6 265 aa19.56■□□□□ 0.72
VPS16-204ENST00000417508 ADGRG2Q8IZP9 1017 aa19.56■□□□□ 0.72
VPS16-204ENST00000417508 TTC16Q8NEE8 873 aa19.56■□□□□ 0.72
VPS16-204ENST00000417508 FBRSL1Q9HCM7 1045 aaKnown RBP19.56■□□□□ 0.72
VPS16-204ENST00000417508 DMAP1Q9NPF5 467 aaPredicted RBP19.56■□□□□ 0.72
VPS16-204ENST00000417508 TMEM30AQ9NV96 361 aa19.56■□□□□ 0.72
VPS16-204ENST00000417508 C2orf42Q9NWW7 574 aa19.56■□□□□ 0.72
VPS16-204ENST00000417508 SPAG17Q6Q759 2223 aa19.56■□□□□ 0.72
VPS16-204ENST00000417508 MYH10P35580 1976 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 RNF40O75150 1001 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 KRT13P13646 458 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 TGM1P22735 817 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 NR2F2P24468 414 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 PSMC2P35998 433 aaKnown RBP19.55■□□□□ 0.72
VPS16-204ENST00000417508 MCCD1P59942 119 aaPredicted RBP19.55■□□□□ 0.72
VPS16-204ENST00000417508 ADAM9Q13443 819 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 HEATR6Q6AI08 1181 aaKnown RBP19.55■□□□□ 0.72
VPS16-204ENST00000417508 PAQR9Q6ZVX9 377 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 ACOT1Q86TX2 421 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 FAM35AQ86V20 835 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 FBXO32Q969P5 355 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 CHAMP1Q96JM3 812 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 KCNK16Q96T55 309 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 IMPG2Q9BZV3 1241 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 DNAI2Q9GZS0 605 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 SDCBP2Q9H190 292 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 TBC1D14Q9P2M4 693 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 CPQQ9Y646 472 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 SDK1Q7Z5N4 2213 aa19.55■□□□□ 0.72
VPS16-204ENST00000417508 FAM92AA1XBS5 289 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 TNFRSF10BO14763 440 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 FOXD2O60548 495 aaPredicted RBP19.54■□□□□ 0.72
VPS16-204ENST00000417508 HLA-DRAP01903 254 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 PRR29P0C7W0 189 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 RAP1GAPP47736 663 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 TUBP50607 506 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 ZXDBP98169 803 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 C1orf220Q5T0J3 134 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 HECTD3Q5T447 861 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 SCARA5Q6ZMJ2 495 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 CEP68Q76N32 757 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 SYT13Q7L8C5 426 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 DGLUCYQ7Z3D6 616 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 FUKQ8N0W3 1084 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 ACDQ96AP0 544 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 FAXDC2Q96IV6 333 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 FBXO44Q9H4M3 255 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 CYP3A43Q9HB55 503 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 CSNK1G1Q9HCP0 422 aa19.54■□□□□ 0.72
VPS16-204ENST00000417508 E2F8A0AVK6 867 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 AP1G2O75843 785 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 AKAP3O75969 853 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 MBL2P11226 248 aaPredicted RBP19.53■□□□□ 0.72
VPS16-204ENST00000417508 GTF2H1P32780 548 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 PIK3CAP42336 1068 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 NDST1P52848 882 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 RSPO4Q2I0M5 234 aaPredicted RBP19.53■□□□□ 0.72
VPS16-204ENST00000417508 EDRF1Q3B7T1 1238 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms