RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 POLR2DO15514 142 aaKnown RBP15.78■□□□□ 0.12
RPS28-201ENST00000417088 OAS1P00973 400 aaKnown RBP15.78■□□□□ 0.12
RPS28-201ENST00000417088 CYP17A1P05093 508 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 DGKEP52429 567 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 SEC13P55735 322 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 ELF2Q15723 593 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 STPG1Q5TH74 334 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 TDRD10Q5VZ19 366 aaKnown RBP15.78■□□□□ 0.12
RPS28-201ENST00000417088 C12orf56Q8IXR9 622 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 KIAA1958Q8N8K9 716 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 CCDC26Q8TAB7 109 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 PLEKHO2Q8TD55 490 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 B3GNT5Q9BYG0 378 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 BACH2Q9BYV9 841 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 ELOVL4Q9GZR5 314 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 MAGEF1Q9HAY2 307 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 SMPD4Q9NXE4 827 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 MAP1BP46821 2468 aaKnown RBP15.78■□□□□ 0.12
RPS28-201ENST00000417088 KMT2BQ9UMN6 2715 aaPredicted RBP15.77■□□□□ 0.12
RPS28-201ENST00000417088 HELZP42694 1942 aaKnown RBP15.77■□□□□ 0.12
RPS28-201ENST00000417088 SCAMP3O14828 347 aaKnown RBP15.77■□□□□ 0.12
RPS28-201ENST00000417088 RHOBTB1O94844 696 aa15.77■□□□□ 0.12
RPS28-201ENST00000417088 ABL1P00519 1130 aa15.77■□□□□ 0.12
RPS28-201ENST00000417088 KCNA4P22459 653 aa15.77■□□□□ 0.12
RPS28-201ENST00000417088 ATICP31939 592 aa15.77■□□□□ 0.12
RPS28-201ENST00000417088 TRPC3Q13507 836 aa15.77■□□□□ 0.12
RPS28-201ENST00000417088 DHCR24Q15392 516 aa15.77■□□□□ 0.12
RPS28-201ENST00000417088 BMT2Q1RMZ1 405 aa15.77■□□□□ 0.12
RPS28-201ENST00000417088 C2orf27AQ580R0 203 aa15.77■□□□□ 0.12
RPS28-201ENST00000417088 FOXD4L5Q5VV16 416 aaPredicted RBP15.77■□□□□ 0.12
RPS28-201ENST00000417088 B3GALNT2Q8NCR0 500 aa15.77■□□□□ 0.12
RPS28-201ENST00000417088 TSTD1Q8NFU3 115 aa15.77■□□□□ 0.12
RPS28-201ENST00000417088 FOXD4L4Q8WXT5 416 aaPredicted RBP15.77■□□□□ 0.12
RPS28-201ENST00000417088 SYAP1Q96A49 352 aaPredicted RBP15.77■□□□□ 0.12
RPS28-201ENST00000417088 SLITRK1Q96PX8 696 aa15.77■□□□□ 0.12
RPS28-201ENST00000417088 SLC39A2Q9NP94 309 aa15.77■□□□□ 0.12
RPS28-201ENST00000417088 CGNQ9P2M7 1197 aaKnown RBP15.77■□□□□ 0.12
RPS28-201ENST00000417088 NXF1Q9UBU9 619 aaKnown RBP15.77■□□□□ 0.12
RPS28-201ENST00000417088 INVSQ9Y283 1065 aa15.77■□□□□ 0.12
RPS28-201ENST00000417088 MYO16Q9Y6X6 1858 aa15.77■□□□□ 0.11
RPS28-201ENST00000417088 ABCA7Q8IZY2 2146 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 KIAA1549LQ6ZVL6 1849 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 PVALEFA0A1B0GWK0 134 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 BCLAF3A2AJT9 711 aaKnown RBP15.76■□□□□ 0.11
RPS28-201ENST00000417088 SLC9A3R1O14745 358 aaPredicted RBP15.76■□□□□ 0.11
RPS28-201ENST00000417088 KRT37O76014 449 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 SLC6A11P48066 632 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 CASP4P49662 377 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 CREB5Q02930 508 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 MESP2Q0VG99 397 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 IFRD2Q12894 506 aaPredicted RBP15.76■□□□□ 0.11
RPS28-201ENST00000417088 CUL4BQ13620 913 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 KNOP1Q1ED39 458 aaKnown RBP15.76■□□□□ 0.11
RPS28-201ENST00000417088 TCEAL6Q6IPX3 200 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 RHBDF2Q6PJF5 856 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 RASSF3Q86WH2 238 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 CCDC33Q8N5R6 958 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 TCEAL3Q969E4 200 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 TPSD1Q9BZJ3 242 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 CFAP97Q9P2B7 532 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 MMP17Q9ULZ9 603 aa15.76■□□□□ 0.11
RPS28-201ENST00000417088 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.75■□□□□ 0.11
RPS28-201ENST00000417088 EXOC3O60645 756 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 PHACTR2O75167 634 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 CAVIN2O95810 425 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 MBL2P11226 248 aaPredicted RBP15.75■□□□□ 0.11
RPS28-201ENST00000417088 CHRM1P11229 460 aaPredicted RBP15.75■□□□□ 0.11
RPS28-201ENST00000417088 YWHAQP27348 245 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 GBP1P32455 592 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 AFMP43652 599 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 CDH8P55286 799 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 MRPS21P82921 87 aaKnown RBP15.75■□□□□ 0.11
RPS28-201ENST00000417088 CRY1Q16526 586 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 FOXD4L6Q3SYB3 417 aaPredicted RBP15.75■□□□□ 0.11
RPS28-201ENST00000417088 USP39Q53GS9 565 aaKnown RBP15.75■□□□□ 0.11
RPS28-201ENST00000417088 N4BP2L1Q5TBK1 243 aaPredicted RBP15.75■□□□□ 0.11
RPS28-201ENST00000417088 ANO7Q6IWH7 933 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 FOXD4L3Q6VB84 417 aaPredicted RBP15.75■□□□□ 0.11
RPS28-201ENST00000417088 PAQR9Q6ZVX9 377 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 SFTPA1Q8IWL2 248 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 NUP93Q8N1F7 819 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 KCNK16Q96T55 309 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 SMYD3Q9H7B4 428 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 VRTNQ9H8Y1 702 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 PCDHA7Q9UN72 937 aa15.75■□□□□ 0.11
RPS28-201ENST00000417088 LRRIQ3A6PVS8 624 aaPredicted RBP15.74■□□□□ 0.11
RPS28-201ENST00000417088 RTN3O95197 1032 aaPredicted RBP15.74■□□□□ 0.11
RPS28-201ENST00000417088 HNRNPLP14866 589 aaKnown RBP eCLIP15.74■□□□□ 0.11
RPS28-201ENST00000417088 EIF2DP41214 584 aaKnown RBP15.74■□□□□ 0.11
RPS28-201ENST00000417088 BIRC3Q13489 604 aa15.74■□□□□ 0.11
RPS28-201ENST00000417088 RESP18Q5W5W9 173 aa15.74■□□□□ 0.11
RPS28-201ENST00000417088 PMS2CLQ68D20 193 aa15.74■□□□□ 0.11
RPS28-201ENST00000417088 RNF43Q68DV7 783 aa15.74■□□□□ 0.11
RPS28-201ENST00000417088 TMEM92Q6UXU6 159 aa15.74■□□□□ 0.11
RPS28-201ENST00000417088 FAM35AQ86V20 835 aa15.74■□□□□ 0.11
RPS28-201ENST00000417088 C12orf40Q86WS4 652 aa15.74■□□□□ 0.11
RPS28-201ENST00000417088 DDX42Q86XP3 938 aaKnown RBP eCLIP15.74■□□□□ 0.11
RPS28-201ENST00000417088 GRAMD1CQ8IYS0 662 aa15.74■□□□□ 0.11
RPS28-201ENST00000417088 PDZD8Q8NEN9 1154 aa15.74■□□□□ 0.11
RPS28-201ENST00000417088 SCAMP5Q8TAC9 235 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms