RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 TRIM72Q6ZMU5 477 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 TMCO2Q7Z6W1 182 aaPredicted RBP8.16□□□□□ -1.1
RBM39-209ENST00000416529 ITIH5Q86UX2 942 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 CREBRFQ8IUR6 639 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 SCML4Q8N228 414 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 ELMOD1Q8N336 334 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 PPM1KQ8N3J5 372 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 UBR7Q8N806 425 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 STK32AQ8WU08 396 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 UBE2Q2Q8WVN8 375 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 KBTBD7Q8WVZ9 684 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 ATXN2LQ8WWM7 1075 aaKnown RBP8.16□□□□□ -1.1
RBM39-209ENST00000416529 PABPC5Q96DU9 382 aaKnown RBP8.16□□□□□ -1.1
RBM39-209ENST00000416529 SPATA17Q96L03 361 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 NECTIN4Q96NY8 510 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 HNRNPABQ99729 332 aaKnown RBP8.16□□□□□ -1.1
RBM39-209ENST00000416529 PAAF1Q9BRP4 392 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 C1QTNF1Q9BXJ1 281 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 KRTAP4-6Q9BYQ5 205 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 ZNF518BQ9C0D4 1074 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 TLE6Q9H808 572 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 ALG13Q9NP73 1137 aaKnown RBP8.16□□□□□ -1.1
RBM39-209ENST00000416529 CISHQ9NSE2 258 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 UXTQ9UBK9 157 aaPredicted RBP8.16□□□□□ -1.1
RBM39-209ENST00000416529 FBXW11Q9UKB1 542 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 SIK3Q9Y2K2 1263 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 PCDHB5Q9Y5E4 795 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 MTCH2Q9Y6C9 303 aa8.16□□□□□ -1.1
RBM39-209ENST00000416529 ZFP37Q9Y6Q3 630 aaPredicted RBP8.16□□□□□ -1.1
RBM39-209ENST00000416529 CDH23Q9H251 3354 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 NCANO14594 1321 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 FAM86C2PA6NEL3 165 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 A6NJY4 79 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 NT5C1B-RDH14C9J2C7 533 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 PES1O00541 588 aaKnown RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 ATXN7O15265 892 aaPredicted RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 TEX28O15482 410 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 SART1O43290 800 aaKnown RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 BNIP3LO60238 219 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 XYLBO75191 536 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 CNPP09543 421 aaKnown RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 FERP16591 822 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 CDC25BP30305 580 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 PBX1P40424 430 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 PDE6CP51160 858 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 CLCN4P51793 760 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 ZNF132P52740 706 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 ERVFC1P60507 584 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 KCNC3Q14003 757 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 CNGA2Q16280 664 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 PABPC1LQ4VXU2 614 aaKnown RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 SGO2Q562F6 1265 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 ARSJQ5FYB0 599 aaPredicted RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 LMBRD2Q68DH5 695 aaPredicted RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 SPECC1LQ69YQ0 1117 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 TMEM173Q86WV6 379 aaPredicted RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 CEP57Q86XR8 500 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 FAM71AQ8IYT1 594 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 ZNF276Q8N554 614 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 B3GALNT2Q8NCR0 500 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 MSANTD4Q8NCY6 345 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 OR6B3Q8NGW1 331 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 SLC22A17Q8WUG5 538 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 BCL7CQ8WUZ0 217 aaPredicted RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 OVCA2Q8WZ82 227 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 ANP32BQ92688 251 aaKnown RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 SEMA4DQ92854 862 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 EEF2KMTQ96G04 330 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 SMARCD1Q96GM5 515 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 TMEM176AQ96HP8 235 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 C8orf48Q96LL4 319 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 NOX5Q96PH1 765 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 SPAG5Q96R06 1193 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 SYT15Q9BQS2 421 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 CLSTN3Q9BQT9 956 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 TRIM62Q9BVG3 475 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 VN1R3Q9BXE9 311 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 NAA15Q9BXJ9 866 aaKnown RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 GPR88Q9GZN0 384 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 VPS16Q9H269 839 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 CXCL16Q9H2A7 254 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 SFXN1Q9H9B4 322 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 APOBEC3GQ9HC16 384 aaKnown RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 UBE2TQ9NPD8 197 aaPredicted RBP8.15□□□□□ -1.1
RBM39-209ENST00000416529 TAB2Q9NYJ8 693 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 IMPACTQ9P2X3 320 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 HESX1Q9UBX0 185 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 CEP83Q9Y592 693 aa8.15□□□□□ -1.1
RBM39-209ENST00000416529 PLXNA4Q9HCM2 1894 aa8.15□□□□□ -1.11
RBM39-209ENST00000416529 ZNF197O14709 1029 aa8.14□□□□□ -1.11
RBM39-209ENST00000416529 PPEF2O14830 753 aa8.14□□□□□ -1.11
RBM39-209ENST00000416529 CLASP2O75122 1294 aaKnown RBP8.14□□□□□ -1.11
RBM39-209ENST00000416529 RTN3O95197 1032 aaPredicted RBP8.14□□□□□ -1.11
RBM39-209ENST00000416529 LSM8O95777 96 aaKnown RBP8.14□□□□□ -1.11
RBM39-209ENST00000416529 CSH1P0DML2 217 aa8.14□□□□□ -1.11
RBM39-209ENST00000416529 CSH2P0DML3 217 aa8.14□□□□□ -1.11
RBM39-209ENST00000416529 HAPLN1P10915 354 aaPredicted RBP8.14□□□□□ -1.11
RBM39-209ENST00000416529 ATP1A3P13637 1013 aa8.14□□□□□ -1.11
RBM39-209ENST00000416529 CPB1P15086 417 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms