RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ATP4AP20648 1035 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 MMP13P45452 471 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 RAP1GAPP47736 663 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 HSD17B4P51659 736 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 ZNF235Q14590 738 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 MTFR1Q15390 333 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 TFDP3Q5H9I0 405 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 RRM2BQ7LG56 351 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 PLD3Q8IV08 490 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 DEFB107AQ8IZN7 70 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 ZNF786Q8N393 782 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 PCDHGB4Q9UN71 923 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 TGFB1I1O43294 461 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 FKBP9O95302 570 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 CLK1P49759 484 aaKnown RBP13.37□□□□□ -0.27
SCN1B-202ENST00000415950 PEX5P50542 639 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 RAP1GDS1P52306 607 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 XRCC4Q13426 336 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 CCDC81Q6ZN84 652 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 FKBP9P1Q75LS8 142 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 SLC51AQ86UW1 340 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 ELMO2Q96JJ3 720 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 PURBQ96QR8 312 aaKnown RBP13.37□□□□□ -0.27
SCN1B-202ENST00000415950 GRID1Q9ULK0 1009 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 DTNAQ9Y4J8 743 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 TFE3P19532 575 aaPredicted RBP13.36□□□□□ -0.27
SCN1B-202ENST00000415950 TNFRSF8P28908 595 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 MSX2P35548 267 aaPredicted RBP13.36□□□□□ -0.27
SCN1B-202ENST00000415950 RARRES1P49788 294 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 TSPY1Q01534 308 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 TBCCQ15814 346 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 SLC44A4Q53GD3 710 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 CCDC92Q53HC0 331 aaPredicted RBP13.36□□□□□ -0.27
SCN1B-202ENST00000415950 RNF220Q5VTB9 566 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 SPOCD1Q6ZMY3 1216 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 RIBC1Q8N443 379 aaPredicted RBP13.36□□□□□ -0.27
SCN1B-202ENST00000415950 TTLL6Q8N841 843 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 BEGAINQ9BUH8 593 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 RNF19AQ9NV58 838 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 CLIC5Q9NZA1 410 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 SMNDC1O75940 238 aaKnown RBP eCLIP13.36□□□□□ -0.27
SCN1B-202ENST00000415950 HMBSP08397 361 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 NFKBIAP25963 317 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 HMOX2P30519 316 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 CDH8P55286 799 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 NME5P56597 212 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 MYL6P60660 151 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 TAP1Q03518 808 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 SLC34A1Q06495 639 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 BTBD8Q5XKL5 378 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
SCN1B-202ENST00000415950 TTC27Q6P3X3 843 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 RINLQ6ZS11 566 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 THEM5Q8N1Q8 247 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 EFHBQ8N7U6 833 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 ETNPPLQ8TBG4 499 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 SEPT8Q92599 483 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 SLC10A4Q96EP9 437 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 WNK4Q96J92 1243 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 BTBD10Q9BSF8 475 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 LATS2Q9NRM7 1088 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.36□□□□□ -0.27
SCN1B-202ENST00000415950 COG5Q9UP83 839 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 ATP11BQ9Y2G3 1177 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 KBTBD13C9JR72 458 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 WDR47O94967 919 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 SP8Q8IXZ3 490 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 NETO2Q8NC67 525 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 IPMKQ8NFU5 416 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 B4GALNT2Q8NHY0 566 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 GCNAQ96QF7 691 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 RIT2Q99578 217 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 C2orf40Q9H1Z8 148 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 C3P01024 1663 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 ADGRA2Q96PE1 1338 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 ARHGEF37A1IGU5 675 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 TBC1D12O60347 775 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 SULT1E1P49888 294 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 SLC25A3Q00325 362 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 PWP1Q13610 501 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 EMC2Q15006 297 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 ZNF606Q8WXB4 792 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 TMEM161AQ9NX61 479 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 ARHGEF38Q9NXL2 777 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 LRCH1Q9Y2L9 728 aa13.36□□□□□ -0.27
SCN1B-202ENST00000415950 PROCP04070 461 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 SPRP35270 261 aaPredicted RBP13.35□□□□□ -0.27
SCN1B-202ENST00000415950 RPL7AP62424 266 aaKnown RBP13.35□□□□□ -0.27
SCN1B-202ENST00000415950 DDR1Q08345 913 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 CLEC16AQ2KHT3 1053 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 KBTBD12Q3ZCT8 623 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 DEPDC1Q5TB30 811 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 TTC33Q6PID6 262 aaPredicted RBP13.35□□□□□ -0.27
SCN1B-202ENST00000415950 EPAS1Q99814 870 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 PLEKHA5Q9HAU0 1116 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 TKFCQ3LXA3 575 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 DIS3LQ8TF46 1054 aaKnown RBP13.35□□□□□ -0.27
SCN1B-202ENST00000415950 ATG4CQ96DT6 458 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 CYP39A1Q9NYL5 469 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 RPS6KL1Q9Y6S9 549 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms