RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 CBX8Q9HC52 389 aa15.46■□□□□ 0.07
LIMS1-206ENST00000414829 TLR8Q9NR97 1041 aaKnown RBP15.46■□□□□ 0.07
LIMS1-206ENST00000414829 IL37Q9NZH6 218 aa15.46■□□□□ 0.07
LIMS1-206ENST00000414829 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.46■□□□□ 0.07
LIMS1-206ENST00000414829 M0QYV0 167 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 TNFRSF10BO14763 440 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 SERPINC1P01008 464 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 CKMP06732 381 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 ASGR2P07307 311 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 USP17L7P0C7H9 530 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 GJA1P17302 382 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 USP8P40818 1118 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 PLA2G4AP47712 749 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 SNX16P57768 344 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 TAF10Q12962 218 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 IQCB1Q15051 598 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 LRSAM1Q6UWE0 723 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 PARM1Q6UWI2 310 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 CCDC186Q7Z3E2 898 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 TMEM150AQ86TG1 271 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 DDX42Q86XP3 938 aaKnown RBP eCLIP15.45■□□□□ 0.06
LIMS1-206ENST00000414829 YAF2Q8IY57 180 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 CELF5Q8N6W0 485 aaKnown RBP15.45■□□□□ 0.06
LIMS1-206ENST00000414829 KIAA1958Q8N8K9 716 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 ZMIZ2Q8NF64 920 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 EDAQ92838 391 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 HSD3B7Q9H2F3 369 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 LRRC4Q9HBW1 653 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 TRPC7Q9HCX4 862 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 SIX2Q9NPC8 291 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 TMEM30AQ9NV96 361 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 THG1LQ9NWX6 298 aaKnown RBP15.45■□□□□ 0.06
LIMS1-206ENST00000414829 SCML2Q9UQR0 700 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 C2orf16Q68DN1 1984 aa15.45■□□□□ 0.06
LIMS1-206ENST00000414829 ZNF840PA6NDX5 716 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 SART1O43290 800 aaKnown RBP15.44■□□□□ 0.06
LIMS1-206ENST00000414829 THAP12O43422 761 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 TADA3O75528 432 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 ATP1A3P13637 1013 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 PSMC3P17980 439 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 BRD2P25440 801 aaKnown RBP15.44■□□□□ 0.06
LIMS1-206ENST00000414829 USP46P62068 366 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 ZXDAP98168 799 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 PLCB2Q00722 1185 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 SIGLEC14Q08ET2 396 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 IFRD2Q12894 506 aaPredicted RBP15.44■□□□□ 0.06
LIMS1-206ENST00000414829 SYCP1Q15431 976 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 SNX30Q5VWJ9 437 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 PIGZQ86VD9 579 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 ARID3BQ8IVW6 561 aaPredicted RBP15.44■□□□□ 0.06
LIMS1-206ENST00000414829 FAM71AQ8IYT1 594 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 SIX6OS1Q8N1H7 587 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 SLC44A3Q8N4M1 653 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 MAB21L3Q8N8X9 362 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 DNASE1L2Q92874 299 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 FGF14Q92915 247 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 HSFY1Q96LI6 401 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 NOX5Q96PH1 765 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 SPAG5Q96R06 1193 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 TRIM62Q9BVG3 475 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 TRMT61BQ9BVS5 477 aaKnown RBP15.44■□□□□ 0.06
LIMS1-206ENST00000414829 STK33Q9BYT3 514 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 NACA2Q9H009 215 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 SLC2A4RGQ9NR83 387 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 FAM207AQ9NSI2 230 aaPredicted RBP15.44■□□□□ 0.06
LIMS1-206ENST00000414829 TDP1Q9NUW8 608 aa15.44■□□□□ 0.06
LIMS1-206ENST00000414829 A0A1W2PQC6 194 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 HHLA1C9JL84 531 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 F8VZ95 297 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 BEST1O76090 585 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 CCDC172P0C7W6 258 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 FCARP24071 287 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 ACADSBP45954 432 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 KIF11P52732 1056 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 PDE4CQ08493 712 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 GOLGA8FQ08AF8 430 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 GOLGA8DPQ0D2H9 430 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 KCNMA1Q12791 1236 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 DRAP1Q14919 205 aaPredicted RBP15.43■□□□□ 0.06
LIMS1-206ENST00000414829 HECTD3Q5T447 861 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 GJB7Q6PEY0 223 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 LUZP1Q86V48 1076 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 TTC30AQ86WT1 665 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 SCML4Q8N228 414 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 STK32AQ8WU08 396 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 KCTD13Q8WZ19 329 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 IQCDQ96DY2 449 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 KXD1Q9BQD3 176 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 ANP32EQ9BTT0 268 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 RTN4Q9NQC3 1192 aaKnown RBP15.43■□□□□ 0.06
LIMS1-206ENST00000414829 CYLDQ9NQC7 956 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 FBXL21Q9UKT6 434 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 ARHGAP26Q9UNA1 814 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 SIK3Q9Y2K2 1263 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 FHOD1Q9Y613 1164 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 MUC3AQ02505 3323 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 NCOR1O75376 2440 aa15.43■□□□□ 0.06
LIMS1-206ENST00000414829 FBXO21O94952 628 aa15.42■□□□□ 0.06
LIMS1-206ENST00000414829 ABL1P00519 1130 aa15.42■□□□□ 0.06
LIMS1-206ENST00000414829 OAS1P00973 400 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms