RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 GDF7Q7Z4P5 450 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 TTC30AQ86WT1 665 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 NRSN1Q8IZ57 195 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 ADGRG5Q8IZF4 528 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 SPPL3Q8TCT6 385 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 ASB12Q8WXK4 309 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 SNX19Q92543 992 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 C3orf49Q96BT1 292 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 FAM89AQ96GI7 184 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 ZNF668Q96K58 619 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 PPM1MQ96MI6 270 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 TRAPPC9Q96Q05 1148 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 RBM15Q96T37 977 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 TRIM5Q9C035 493 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 BRD8Q9H0E9 1235 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 TP63Q9H3D4 680 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 PRDM8Q9NQV8 689 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 USP22Q9UPT9 525 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 XDHP47989 1333 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 KRTAP9-6A0A140TA67 174 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 A0A1B0GVC2 190 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 MYADML2A6NDP7 307 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 SNX2O60749 519 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 FAM155BO75949 473 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 KRT38O76015 456 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 CSF1RP07333 972 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 ZSCAN22P10073 491 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 JUPP14923 745 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 CST5P28325 142 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 DDIT3P35638 169 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 AARSP49588 968 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 GEMIN4P57678 1058 aaKnown RBP5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 TUBB3Q13509 450 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 CCNIQ14094 377 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 RPS6KA2Q15349 733 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 GEN1Q17RS7 908 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 FAM110CQ1W6H9 321 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 P3H1Q32P28 736 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 CERCAMQ5T4B2 595 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 INTS11Q5TA45 600 aaKnown RBP5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 ICE2Q659A1 982 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 SFRP4Q6FHJ7 346 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 CLEC9AQ6UXN8 241 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 Q6ZSN1 163 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 MICALCLQ6ZW33 695 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 TMPRSS9Q7Z410 1059 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 LRRTM4Q86VH4 590 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 TMEM132CQ8N3T6 1108 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 ABHD5Q8WTS1 349 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 ATRIPQ8WXE1 791 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 GOLGA1Q92805 767 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 SKA1Q96BD8 255 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 COG8Q96MW5 612 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 SEC62Q99442 399 aaKnown RBP5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 TMX4Q9H1E5 349 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 ELAC1Q9H777 363 aaKnown RBP5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 MAP3K20Q9NYL2 800 aaKnown RBP5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 FBXO9Q9UK97 447 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 NOX1Q9Y5S8 564 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 FPGT-TNNI3KV9GXZ4 949 aa5.49□□□□□ -1.53
HMGB3P31-201ENST00000413333 SPATA31A3Q5VYP0 1347 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 A0A1W2PS29 197 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 OTOL1A6NHN0 477 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 H0Y3Z8 333 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 AGPSO00116 658 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 PPP6R2O75170 966 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 RECQL4O94761 1208 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 PPIFP30405 207 aaKnown RBP5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 UQCRC1P31930 480 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 GATMP50440 423 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 PDE6CP51160 858 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 CXADRP78310 365 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 SIM2Q14190 667 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 RRP1BQ14684 758 aaKnown RBP5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 HLXQ14774 488 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 SPDYE7PQ495Y7 208 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 B3GNTL1Q67FW5 361 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 CLEC4GQ6UXB4 293 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 MAMDC4Q6UXC1 1216 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 LRRC55Q6ZSA7 311 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 HTR3DQ70Z44 454 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 FSTL5Q8N475 847 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 ESX1Q8N693 406 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 C11orf44Q8N8P7 122 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 OR6Y1Q8NGX8 325 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 WDR60Q8WVS4 1066 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 MAELQ96JY0 434 aaKnown RBP5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 DDX23Q9BUQ8 820 aaKnown RBP5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 SLC26A6Q9BXS9 759 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 KCNE5Q9UJ90 142 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 GJD2Q9UKL4 321 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 SSX2IPQ9Y2D8 614 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 CHST2Q9Y4C5 530 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 SNX14Q9Y5W7 946 aa5.48□□□□□ -1.53
HMGB3P31-201ENST00000413333 OR2W5A6NFC9 320 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 AHRRA9YTQ3 701 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 TISP43B9A030 160 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 ZNF623O75123 536 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 TAF5LO75529 589 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 RHOBTB3O94955 611 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms