RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ANKS3Q6ZW76 656 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 SLC26A9Q7LBE3 791 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 TAS1R1Q7RTX1 841 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 GPRIN1Q7Z2K8 1008 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 CREG2Q8IUH2 290 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 SPATA2LQ8IUW3 424 aaPredicted RBP6.99□□□□□ -1.29
VPS41-204ENST00000413141 HERC6Q8IVU3 1022 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 SCUBE3Q8IX30 993 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 SIX6OS1Q8N1H7 587 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 EMC1Q8N766 993 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 UBL4BQ8N7F7 174 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 LRRN4CLQ8ND94 238 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 MYRIPQ8NFW9 859 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 UBE2Q2Q8WVN8 375 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 PIK3R5Q8WYR1 880 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 ALG3Q92685 438 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 KRT35Q92764 455 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 TMEM169Q96HH4 297 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 ABHD8Q96I13 439 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 FUBP3Q96I24 572 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS41-204ENST00000413141 CAPZA3Q96KX2 299 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 KCNK16Q96T55 309 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 CARD6Q9BX69 1037 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 OXCT2Q9BYC2 517 aaPredicted RBP6.99□□□□□ -1.29
VPS41-204ENST00000413141 UBXN6Q9BZV1 441 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 LRRC4Q9HBW1 653 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 PNPLA8Q9NP80 782 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 CHST7Q9NS84 486 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 MTRRQ9UBK8 725 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 TMEM59LQ9UK28 342 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 MYH10P35580 1976 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 MTMR11A4FU01 709 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 C2CD4BA6NLJ0 364 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 F8VP50 259 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 PDE2AO00408 941 aaPredicted RBP6.98□□□□□ -1.29
VPS41-204ENST00000413141 TRIM66O15016 1216 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 PSTPIP1O43586 416 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 HSF2BPO75031 334 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 LRCH4O75427 683 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 TADA3O75528 432 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 DAB1O75553 588 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 GRAP2O75791 330 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 FBXO21O94952 628 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 VNN2O95498 520 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 CPB1P15086 417 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 TCF4P15884 667 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 ATP2A2P16615 1042 aaKnown RBP6.98□□□□□ -1.29
VPS41-204ENST00000413141 GPD1P21695 349 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 CYP2F1P24903 491 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 MAGEA11P43364 429 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 GLUD2P49448 558 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 PEX5P50542 639 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 ZNF143P52747 638 aaPredicted RBP6.98□□□□□ -1.29
VPS41-204ENST00000413141 RABGGTBP53611 331 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 SLC5A3P53794 718 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 DAOAP59103 153 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 TAS2R40P59535 323 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 MRPS5P82675 430 aaKnown RBP6.98□□□□□ -1.29
VPS41-204ENST00000413141 DSG1Q02413 1049 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 SLC25A11Q02978 314 aaKnown RBP6.98□□□□□ -1.29
VPS41-204ENST00000413141 TAF5Q15542 800 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 PSMD5Q16401 504 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 CCDC181Q5TID7 509 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 RASIP1Q5U651 963 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 SLC8B1Q6J4K2 584 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 PRSS55Q6UWB4 352 aaPredicted RBP6.98□□□□□ -1.29
VPS41-204ENST00000413141 VSTM1Q6UX27 236 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 RSPO2Q6UXX9 243 aaPredicted RBP6.98□□□□□ -1.29
VPS41-204ENST00000413141 ARCQ7LC44 396 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 BHLHA9Q7RTU4 235 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 ZNF572Q7Z3I7 529 aaPredicted RBP6.98□□□□□ -1.29
VPS41-204ENST00000413141 DDX53Q86TM3 631 aaKnown RBP6.98□□□□□ -1.29
VPS41-204ENST00000413141 RHOT1Q8IXI2 618 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 RASGEF1CQ8N431 466 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 FIBCD1Q8N539 461 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 CEP112Q8N8E3 955 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 MNS1Q8NEH6 495 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 PHOSPHO2Q8TCD6 241 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 RXFP2Q8WXD0 754 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 RIN2Q8WYP3 895 aaPredicted RBP6.98□□□□□ -1.29
VPS41-204ENST00000413141 KHSRPQ92945 711 aaKnown RBP eCLIP6.98□□□□□ -1.292e-6■■□□□ 12.2
VPS41-204ENST00000413141 CLP1Q92989 425 aaKnown RBP6.98□□□□□ -1.29
VPS41-204ENST00000413141 PBKQ96KB5 322 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 CFAP57Q96MR6 1250 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 PGLYRP2Q96PD5 576 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 ULBP1Q9BZM6 244 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 CARD9Q9H257 536 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 MTIF3Q9H2K0 278 aaKnown RBP6.98□□□□□ -1.29
VPS41-204ENST00000413141 CNGB3Q9NQW8 809 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 AAASQ9NRG9 546 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 ASNSD1Q9NWL6 643 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 ABI2Q9NYB9 513 aaPredicted RBP6.98□□□□□ -1.29
VPS41-204ENST00000413141 SMARCAL1Q9NZC9 954 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 SPG21Q9NZD8 308 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 EHD2Q9NZN4 543 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 USTQ9Y2C2 406 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 INSL6Q9Y581 213 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 PCDHB5Q9Y5E4 795 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 PCDHA3Q9Y5H8 950 aa6.98□□□□□ -1.29
VPS41-204ENST00000413141 BACE2Q9Y5Z0 518 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms