RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 GKN1Q9NS71 199 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 SAMSN1Q9NSI8 373 aaKnown RBP13.91□□□□□ -0.18
SSB-203ENST00000413002 SMPD4Q9NXE4 827 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 GTSE1Q9NYZ3 720 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 GMIPQ9P107 970 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 PCDHB4Q9Y5E5 795 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 WDFY4Q6ZS81 3184 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 PTPRDP23468 1912 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 HHLA1C9JL84 531 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 RNF225M0QZC1 329 aaPredicted RBP13.9□□□□□ -0.18
SSB-203ENST00000413002 ARNTLO00327 626 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 PMM2O15305 246 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 CHADO15335 359 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 P4HA2O15460 535 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 RTN3O95197 1032 aaPredicted RBP13.9□□□□□ -0.18
SSB-203ENST00000413002 USP17L7P0C7H9 530 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 TRIM21P19474 475 aaKnown RBP13.9□□□□□ -0.18
SSB-203ENST00000413002 SLC9A1P19634 815 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 ACO1P21399 889 aaKnown RBP13.9□□□□□ -0.18
SSB-203ENST00000413002 ERCC5P28715 1186 aaPredicted RBP13.9□□□□□ -0.18
SSB-203ENST00000413002 CLCN5P51795 746 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 STARD6P59095 220 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 ZXDBP98169 803 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 PHLDB3Q6NSJ2 640 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 RBM43Q6ZSC3 357 aaKnown RBP13.9□□□□□ -0.18
SSB-203ENST00000413002 SH3RF2Q8TEC5 729 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 FAXDC2Q96IV6 333 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 CEP295NLQ96MC4 621 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 SLITRK1Q96PX8 696 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 DUSP16Q9BY84 665 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 THAP9Q9H5L6 903 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 CCSER2Q9H7U1 834 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 DACH1Q9UI36 760 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 NDRG2Q9UN36 371 aaKnown RBP13.9□□□□□ -0.18
SSB-203ENST00000413002 PIAS3Q9Y6X2 628 aa13.9□□□□□ -0.18
SSB-203ENST00000413002 KANSL1LA0AUZ9 987 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 FAM170BA6NMN3 283 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 TULP2O00295 520 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 CYP26A1O43174 497 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 GLULP15104 373 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 ARSAP15289 507 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 TBXAS1P24557 533 aaPredicted RBP13.89□□□□□ -0.19
SSB-203ENST00000413002 WEE1P30291 646 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 KPNA1P52294 538 aaPredicted RBP13.89□□□□□ -0.19
SSB-203ENST00000413002 GOLGA7BQ2TAP0 167 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 C11orf57Q6ZUT1 292 aaPredicted RBP13.89□□□□□ -0.19
SSB-203ENST00000413002 TTC30AQ86WT1 665 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 TTC39CQ8N584 583 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 UBA3Q8TBC4 463 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 CSGALNACT1Q8TDX6 532 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 TFAP2BQ92481 460 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 DNASE1L2Q92874 299 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 SHDQ96IW2 340 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 KREMEN1Q96MU8 473 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 ZSWIM1Q9BR11 485 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 EBF3Q9H4W6 596 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 UBE2TQ9NPD8 197 aaPredicted RBP13.89□□□□□ -0.19
SSB-203ENST00000413002 OBP2AQ9NY56 170 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 IL37Q9NZH6 218 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 EHD2Q9NZN4 543 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 TMEM63CQ9P1W3 806 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 SIT1Q9Y3P8 196 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 WNT6Q9Y6F9 365 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 MUC6Q6W4X9 2439 aa13.89□□□□□ -0.19
SSB-203ENST00000413002 ZNF318Q5VUA4 2279 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 OTOL1A6NHN0 477 aaPredicted RBP13.88□□□□□ -0.19
SSB-203ENST00000413002 MBD3O95983 291 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 TARSP26639 723 aaKnown RBP13.88□□□□□ -0.19
SSB-203ENST00000413002 YWHAEP62258 255 aaKnown RBP13.88□□□□□ -0.19
SSB-203ENST00000413002 PRKCQQ04759 706 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 ARHGAP29Q52LW3 1261 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 SGO2Q562F6 1265 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 CCDC183Q5T5S1 534 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 ARHGAP17Q68EM7 881 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 CC2D1AQ6P1N0 951 aaPredicted RBP13.88□□□□□ -0.19
SSB-203ENST00000413002 TXNDC11Q6PKC3 985 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 SASS6Q6UVJ0 657 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 RBBP8NLQ8NC74 664 aaPredicted RBP13.88□□□□□ -0.19
SSB-203ENST00000413002 PJA1Q8NG27 643 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 DDX23Q9BUQ8 820 aaKnown RBP13.88□□□□□ -0.19
SSB-203ENST00000413002 DNAI2Q9GZS0 605 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 LINC00597Q9H2U6 94 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 LTB4R2Q9NPC1 389 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 HPS4Q9NQG7 708 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 THG1LQ9NWX6 298 aaKnown RBP13.88□□□□□ -0.19
SSB-203ENST00000413002 OSER1Q9NX31 292 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 ZMYM5Q9UJ78 669 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 NUDT5Q9UKK9 219 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 TSPAN16Q9UKR8 245 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 NFE2L3Q9Y4A8 694 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 CPQQ9Y646 472 aa13.88□□□□□ -0.19
SSB-203ENST00000413002 SOBPA7XYQ1 873 aa13.87□□□□□ -0.19
SSB-203ENST00000413002 KCNJ18B7U540 433 aa13.87□□□□□ -0.19
SSB-203ENST00000413002 H0Y858 1186 aa13.87□□□□□ -0.19
SSB-203ENST00000413002 LEFTY2O00292 366 aa13.87□□□□□ -0.19
SSB-203ENST00000413002 PES1O00541 588 aaKnown RBP13.87□□□□□ -0.19
SSB-203ENST00000413002 COCHO43405 550 aa13.87□□□□□ -0.19
SSB-203ENST00000413002 GABBR2O75899 941 aa13.87□□□□□ -0.19
SSB-203ENST00000413002 TBX18O95935 607 aa13.87□□□□□ -0.19
SSB-203ENST00000413002 OAS1P00973 400 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms