RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 NAA15Q9BXJ9 866 aaKnown RBP13.93□□□□□ -0.18
HDAC8-210ENST00000412342 DNAI2Q9GZS0 605 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 COMMD8Q9NX08 183 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 ZMYM5Q9UJ78 669 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 KIAA1257Q9ULG3 409 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 ZNF840PA6NDX5 716 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 LGALS16A8MUM7 142 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 TULP2O00295 520 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 RTN3O95197 1032 aaPredicted RBP13.92□□□□□ -0.18
HDAC8-210ENST00000412342 OLFM2O95897 454 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 ZDHHC11BP0C7U3 371 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 CD19P15391 556 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 BRD2P25440 801 aaKnown RBP13.92□□□□□ -0.18
HDAC8-210ENST00000412342 YWHAQP27348 245 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 VIPR2P41587 438 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 PGFP49763 221 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 KLK7P49862 253 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 MFAP3P55082 362 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 KLHDC7AQ5VTJ3 777 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 SNX30Q5VWJ9 437 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 LCLAT1Q6UWP7 414 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 VITQ6UXI7 678 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 ARID3BQ8IVW6 561 aaPredicted RBP13.92□□□□□ -0.18
HDAC8-210ENST00000412342 UBALD2Q8IYN6 164 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 CMTM8Q8IZV2 173 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 MAB21L3Q8N8X9 362 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 MRPS31Q92665 395 aaKnown RBP13.92□□□□□ -0.18
HDAC8-210ENST00000412342 ASIC4Q96FT7 647 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 SLC22A12Q96S37 553 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 UBXN6Q9BZV1 441 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 GANQ9H2C0 597 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 SLITRK6Q9H5Y7 841 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 CBX8Q9HC52 389 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 ACP6Q9NPH0 428 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 PLCB1Q9NQ66 1216 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 EHD2Q9NZN4 543 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 DNAJC12Q9UKB3 198 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.92□□□□□ -0.18
HDAC8-210ENST00000412342 SIK3Q9Y2K2 1263 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 FHOD1Q9Y613 1164 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 USP3Q9Y6I4 520 aa13.92□□□□□ -0.18
HDAC8-210ENST00000412342 COL4A3Q01955 1670 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 C2orf78A6NCI8 922 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 SMTNL1A8MU46 457 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 SRFP11831 508 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 KIF11P52732 1056 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 BCAT1P54687 386 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 PDE4CQ08493 712 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 SIGLEC14Q08ET2 396 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 IFRD2Q12894 506 aaPredicted RBP13.91□□□□□ -0.18
HDAC8-210ENST00000412342 CNGA2Q16280 664 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 ARHGAP44Q17R89 818 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 RAB41Q5JT25 222 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 TRIM67Q6ZTA4 783 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 PIGZQ86VD9 579 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 RIN3Q8TB24 985 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 OVCA2Q8WZ82 227 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 USP13Q92995 863 aaPredicted RBP13.91□□□□□ -0.18
HDAC8-210ENST00000412342 FBXO32Q969P5 355 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 LSM14BQ9BX40 385 aaKnown RBP13.91□□□□□ -0.18
HDAC8-210ENST00000412342 SMG9Q9H0W8 520 aaKnown RBP13.91□□□□□ -0.18
HDAC8-210ENST00000412342 ZFP14Q9HCL3 533 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 SLC2A4RGQ9NR83 387 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 OBP2AQ9NY56 170 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 TRPM5Q9NZQ8 1165 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 TICRRQ7Z2Z1 1910 aa13.91□□□□□ -0.18
HDAC8-210ENST00000412342 HEPACAM2A8MVW5 462 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 FOXN3O00409 490 aaPredicted RBP13.9□□□□□ -0.18
HDAC8-210ENST00000412342 PES1O00541 588 aaKnown RBP13.9□□□□□ -0.18
HDAC8-210ENST00000412342 XPO1O14980 1071 aaKnown RBP13.9□□□□□ -0.18
HDAC8-210ENST00000412342 EPHB6O15197 1021 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 GABBR2O75899 941 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 OAS1P00973 400 aaKnown RBP13.9□□□□□ -0.18
HDAC8-210ENST00000412342 PNMA6AP0CW24 399 aaPredicted RBP13.9□□□□□ -0.18
HDAC8-210ENST00000412342 KRT5P13647 590 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 UCHL3P15374 230 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 PLA2G4AP47712 749 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 PPP3CCP48454 512 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 GPC5P78333 572 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 FCHO2Q0JRZ9 810 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 BST2Q10589 180 aaKnown RBP13.9□□□□□ -0.18
HDAC8-210ENST00000412342 ZNF268Q14587 947 aaPredicted RBP13.9□□□□□ -0.18
HDAC8-210ENST00000412342 STILQ15468 1287 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 LUZP1Q86V48 1076 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 GPIHBP1Q8IV16 184 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 FAM71AQ8IYT1 594 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 PDZD8Q8NEN9 1154 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 ANKRD20A12PQ8NF67 263 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 SLC35F5Q8WV83 523 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 SLITRK1Q96PX8 696 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 ERGIC2Q96RQ1 377 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 CYP2S1Q96SQ9 504 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 GMIPQ9P107 970 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 SCML2Q9UQR0 700 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 CCL26Q9Y258 94 aa13.9□□□□□ -0.18
HDAC8-210ENST00000412342 ARNTLO00327 626 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 CYP26A1O43174 497 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 CAVIN2O95810 425 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 CFHP08603 1231 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 SETSIPP0DME0 302 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms