RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 MAFO75444 373 aaPredicted RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 PGM3O95394 542 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 PON1P27169 355 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 IARSP41252 1262 aaKnown RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 BTDP43251 543 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 ALDH1A3P47895 512 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 GPX6P59796 221 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 POU6F1Q14863 301 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 CFAP161Q6P656 301 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 NOSTRINQ8IVI9 506 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 BEND7Q8N7W2 519 aaPredicted RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 TEX47Q8TBZ9 253 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 RAET1EQ8TD07 263 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 GRAMD1AQ96CP6 724 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 PLEKHA8Q96JA3 519 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 ZNF641Q96N77 438 aaPredicted RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 RANBP9Q96S59 729 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 CDRT15Q96T59 188 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 NUDT12Q9BQG2 462 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 MCMBPQ9BTE3 642 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 PHF20Q9BVI0 1012 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 TEX13BQ9BXU2 312 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 LY9Q9HBG7 655 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 LRRC4BQ9NT99 713 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 REV1Q9UBZ9 1251 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 TSR3Q9UJK0 312 aaKnown RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 ARL2BPQ9Y2Y0 163 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 MRPS23Q9Y3D9 190 aaKnown RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 PTPRUQ92729 1446 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 SOS2Q07890 1332 aaPredicted RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 ILVBLA1L0T0 632 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 ARHGEF35A5YM69 484 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 OPHN1O60890 802 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 NDUFS2O75306 463 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 URODP06132 367 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 INHBBP09529 407 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 UBTFL1P0CB47 393 aaPredicted RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 PAFAH1B1P43034 410 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 EIF4A1P60842 406 aaKnown RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 PLD1Q13393 1074 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 EFTUD2Q15029 972 aaKnown RBP eCLIP5.44□□□□□ -1.542e-6■□□□□ 10.5
HERC4-205ENST00000412272 MAPK6Q16659 721 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 TBRG1Q3YBR2 411 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 CCNJQ5T5M9 372 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 OGFOD2Q6N063 350 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 AAGABQ6PD74 315 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 CRTC1Q6UUV9 634 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 BEND4Q6ZU67 534 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 G2E3Q7L622 706 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 JAZF1Q86VZ6 243 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 FIBCD1Q8N539 461 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 BORCS5Q969J3 196 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 PAGE5Q96GU1 130 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 FAM227BQ96M60 508 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 ECSITQ9BQ95 431 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 MOV10Q9HCE1 1003 aaKnown RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 ATP13A1Q9HD20 1204 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 RBM12Q9NTZ6 932 aaKnown RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 STX18Q9P2W9 335 aaKnown RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 ZNF212Q9UDV6 495 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 FBXO40Q9UH90 709 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 CYB5R1Q9UHQ9 305 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 CNOT7Q9UIV1 285 aaKnown RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 KLF2Q9Y5W3 355 aaPredicted RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 CEPT1Q9Y6K0 416 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 UTYO14607 1347 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 MAGEB16A2A368 324 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 SLC9B1P1A6NJY1 282 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 ZBTB14O43829 449 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 EXOC3O60645 756 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 PLA2G6O60733 806 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 ZPR1O75312 459 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 JRKO75564 520 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 SUN1O94901 812 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 HEXIM1O94992 359 aaKnown RBP5.43□□□□□ -1.54
HERC4-205ENST00000412272 AGTP01019 485 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 FAM228BP0C875 321 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 ITGA2P17301 1181 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 CDH2P19022 906 aaPredicted RBP5.43□□□□□ -1.54
HERC4-205ENST00000412272 CCNA2P20248 432 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 GPD2P43304 727 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 NPY2RP49146 381 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 ERFP50548 548 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 HADHBP55084 474 aaKnown RBP5.43□□□□□ -1.54
HERC4-205ENST00000412272 FOLH1Q04609 750 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 PRKCQQ04759 706 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 KRT31Q15323 416 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 RGS21Q2M5E4 152 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 ALKBH5Q6P6C2 394 aaKnown RBP5.43□□□□□ -1.54
HERC4-205ENST00000412272 LIMS2Q7Z4I7 341 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 ZNF410Q86VK4 478 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 TEX19Q8NA77 164 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 SCFD2Q8WU76 684 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 GAS2L1Q99501 681 aaPredicted RBP5.43□□□□□ -1.54
HERC4-205ENST00000412272 MNTQ99583 582 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 CHP1Q99653 195 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 C17orf62Q9BQA9 187 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 SEC22CQ9BRL7 303 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 IL1RAPL2Q9NP60 686 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 RRN3Q9NYV6 651 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms