RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 GEMIN4P57678 1058 aaKnown RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 PLD1Q13393 1074 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 ZNF268Q14587 947 aaPredicted RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 GRIK5Q16478 980 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 KCNT1Q5JUK3 1230 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 CELF3Q5SZQ8 465 aaKnown RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 NT5DC1Q5TFE4 455 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 ZNF571Q7Z3V5 609 aaPredicted RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 ZNF467Q7Z7K2 595 aaPredicted RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 LRRC6Q86X45 466 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 REXO1L1PQ8IX06 675 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 MTMR9Q96QG7 549 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 PRMT1Q99873 361 aaKnown RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 ADAM33Q9BZ11 813 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 TMEM134Q9H6X4 195 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 RUBCNLQ9H714 662 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 BLOC1S4Q9NUP1 217 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 SLC39A10Q9ULF5 831 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 RPS6KL1Q9Y6S9 549 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 RIC1Q4ADV7 1423 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 RNASEH1O60930 286 aaKnown RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 SERPIND1P05546 499 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 KRT16P08779 473 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 PAEPP09466 180 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 PDE1CQ14123 709 aaPredicted RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 C2CD6Q53TS8 623 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 TMCO4Q5TGY1 634 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 DDX42Q86XP3 938 aaKnown RBP eCLIP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 ST13P4Q8IZP2 240 aaPredicted RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 HS6ST3Q8IZP7 471 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 BLOC1S5Q8TDH9 187 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 DDI1Q8WTU0 396 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 ZNF606Q8WXB4 792 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 BHMTQ93088 406 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 RNF208Q9H0X6 261 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 PORCNQ9H237 461 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 ZCCHC17Q9NP64 241 aaKnown RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 TSPAN16Q9UKR8 245 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 MORC2Q9Y6X9 1032 aaPredicted RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 SOAT2O75908 522 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 AMHP03971 560 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 IL10P22301 178 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 AKAP5P24588 427 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 CCR1P32246 355 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 SARSP49591 514 aaKnown RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 VCPP55072 806 aaKnown RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 OTUD4Q01804 1114 aaKnown RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 WASHC5Q12768 1159 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 C11orf63Q6NUN7 778 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 NOA1Q8NC60 698 aaKnown RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 TATDN2Q93075 761 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 SLC35C1Q96A29 364 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 SPATA17Q96L03 361 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 TSPYL2Q9H2G4 693 aaPredicted RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 RIC8BQ9NVN3 520 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 PSD3Q9NYI0 1048 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 VPS28Q9UK41 221 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 CLCA2Q9UQC9 943 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 CDY2AQ9Y6F7 541 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 CDY1Q9Y6F8 540 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 SDR42E2A6NKP2 422 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 PCBP1Q15365 356 aaKnown RBP eCLIP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 C6orf10Q5SRN2 563 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 LRRC8EQ6NSJ5 796 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 SPOCD1Q6ZMY3 1216 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 SNX31Q8N9S9 440 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 SLC20A1Q8WUM9 679 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 ARL8AQ96BM9 186 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 SMARCD1Q96GM5 515 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 ELOVL4Q9GZR5 314 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 ECT2Q9H8V3 914 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 KCNMB3Q9NPA1 279 aa9.42□□□□□ -0.9
PBRM1-208ENST00000410007 TRMT6Q9UJA5 497 aaKnown RBP9.42□□□□□ -0.9
PBRM1-208ENST00000410007 SPDYE5A6NIY4 337 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 SLC12A3P55017 1021 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 HNRNPH2P55795 449 aaKnown RBP9.41□□□□□ -0.9
PBRM1-208ENST00000410007 MKRN4PQ13434 485 aaPredicted RBP9.41□□□□□ -0.9
PBRM1-208ENST00000410007 HIC1Q14526 733 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 SPDYE7PQ495Y7 208 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 RGS9BPQ6ZS82 235 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 NYAP1Q6ZVC0 841 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 HOMEZQ8IX15 550 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 CARNMT1Q8N4J0 409 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 SERPINB12Q96P63 405 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 LRRC40Q9H9A6 602 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 DMAP1Q9NPF5 467 aaPredicted RBP9.41□□□□□ -0.9
PBRM1-208ENST00000410007 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.41□□□□□ -0.9
PBRM1-208ENST00000410007 UBIAD1Q9Y5Z9 338 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 CAMTA1Q9Y6Y1 1673 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 CNTNAP2Q9UHC6 1331 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 CYP3A7-CYP3A51PA0A087WV96 503 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 LRRIQ3A6PVS8 624 aaPredicted RBP9.41□□□□□ -0.9
PBRM1-208ENST00000410007 LACTBL1A8MY62 500 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 CLASP2O75122 1294 aaKnown RBP9.41□□□□□ -0.9
PBRM1-208ENST00000410007 PSMD10O75832 226 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 CYP3A7P24462 503 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 FBXW4P57775 412 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 NOGQ13253 232 aa9.41□□□□□ -0.9
PBRM1-208ENST00000410007 SLC29A2Q14542 456 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms