RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 PITPNM3Q9BZ71 974 aa20.75■□□□□ 0.91
LIMS2-207ENST00000409808 NXF1Q9UBU9 619 aaKnown RBP20.75■□□□□ 0.91
LIMS2-207ENST00000409808 TBK1Q9UHD2 729 aa20.75■□□□□ 0.91
LIMS2-207ENST00000409808 PIN4Q9Y237 131 aaKnown RBP20.75■□□□□ 0.91
LIMS2-207ENST00000409808 STARD13Q9Y3M8 1113 aa20.75■□□□□ 0.91
LIMS2-207ENST00000409808 EXOC1LA0A1B0GW35 172 aa20.74■□□□□ 0.91
LIMS2-207ENST00000409808 TMEM191CA6NGB0 347 aa20.74■□□□□ 0.91
LIMS2-207ENST00000409808 LSM8O95777 96 aaKnown RBP20.74■□□□□ 0.91
LIMS2-207ENST00000409808 ELF1P32519 619 aa20.74■□□□□ 0.91
LIMS2-207ENST00000409808 CCDC142Q17RM4 750 aa20.74■□□□□ 0.91
LIMS2-207ENST00000409808 NOTUMQ6P988 496 aa20.74■□□□□ 0.91
LIMS2-207ENST00000409808 TRABD2AQ86V40 505 aa20.74■□□□□ 0.91
LIMS2-207ENST00000409808 ALLCQ8N6M5 410 aa20.74■□□□□ 0.91
LIMS2-207ENST00000409808 GPATCH11Q8N954 259 aa20.74■□□□□ 0.91
LIMS2-207ENST00000409808 SLITRK1Q96PX8 696 aa20.74■□□□□ 0.91
LIMS2-207ENST00000409808 APOL6Q9BWW8 343 aa20.74■□□□□ 0.91
LIMS2-207ENST00000409808 NXF3Q9H4D5 531 aaKnown RBP20.74■□□□□ 0.91
LIMS2-207ENST00000409808 DDX56Q9NY93 547 aaKnown RBP20.74■□□□□ 0.91
LIMS2-207ENST00000409808 CCNB1P14635 433 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 GRM5P41594 1212 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 ZNF394Q53GI3 561 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 C2CD6Q53TS8 623 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 ASRGL1Q7L266 308 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 FITM2Q8N6M3 262 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 ZNF518BQ9C0D4 1074 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 ASB7Q9H672 318 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 EBF2Q9HAK2 575 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 SAYSD1Q9NPB0 183 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 ZNF148Q9UQR1 794 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.73■□□□□ 0.91
LIMS2-207ENST00000409808 CTSHP09668 335 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 RAP1GAPP47736 663 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 TMEM132DQ14C87 1099 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 DCAF4L1Q3SXM0 396 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 PASD1Q8IV76 773 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 CXorf38Q8TB03 319 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 RAET1EQ8TD07 263 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 ZNF606Q8WXB4 792 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 CFHR5Q9BXR6 569 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 PHACTR1Q9C0D0 580 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 NIF3L1Q9GZT8 377 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 MLXIPLQ9NP71 852 aa20.73■□□□□ 0.91
LIMS2-207ENST00000409808 ALOX15BO15296 676 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 ASMTLO95671 621 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 CCND1P24385 295 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 AKAP5P24588 427 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 ZNF132P52740 706 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 CRYBB1P53674 252 aaPredicted RBP20.72■□□□□ 0.91
LIMS2-207ENST00000409808 SPARCL1Q14515 664 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 E2F5Q15329 346 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 TMED2Q15363 201 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 UBR7Q8N806 425 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 KLHDC9Q8NEP7 349 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 FBF1Q8TES7 1133 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 KIF12Q96FN5 646 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 SLC24A2Q9UI40 661 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 HMGCRP04035 888 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 ASPAP45381 313 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 KCNJ2P63252 427 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 PIGHQ14442 188 aaPredicted RBP20.72■□□□□ 0.91
LIMS2-207ENST00000409808 WDR72Q3MJ13 1102 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 DAB2IPQ5VWQ8 1189 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 CCSAPQ6IQ19 270 aaPredicted RBP20.72■□□□□ 0.91
LIMS2-207ENST00000409808 CGB2Q6NT52 195 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 PCGF5Q86SE9 256 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 DENND1AQ8TEH3 1009 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 NKD2Q969F2 451 aaPredicted RBP20.72■□□□□ 0.91
LIMS2-207ENST00000409808 ZMAT2Q96NC0 199 aaKnown RBP20.72■□□□□ 0.91
LIMS2-207ENST00000409808 CISHQ9NSE2 258 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 TXLNGQ9NUQ3 528 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 SHOC2Q9UQ13 582 aa20.72■□□□□ 0.91
LIMS2-207ENST00000409808 KRT1P04264 644 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 ITGAVP06756 1048 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 HOXD10P28358 340 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 POLR2BP30876 1174 aaKnown RBP20.71■□□□□ 0.91
LIMS2-207ENST00000409808 CDH8P55286 799 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 KYAT1Q16773 422 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 GLRA4Q5JXX5 417 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 TLDC1Q6P9B6 456 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 SPOCD1Q6ZMY3 1216 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 NME8Q8N427 588 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 FRMD8P1Q9BZ68 369 aaPredicted RBP20.71■□□□□ 0.91
LIMS2-207ENST00000409808 TRIM6Q9C030 488 aaPredicted RBP20.71■□□□□ 0.91
LIMS2-207ENST00000409808 FETUBQ9UGM5 382 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 DNPEPQ9ULA0 475 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 CDY2AQ9Y6F7 541 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 FOXN2P32314 431 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 ARSEP51690 589 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 WDR4P57081 412 aaKnown RBP20.71■□□□□ 0.91
LIMS2-207ENST00000409808 NKX3-2P78367 333 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 SETDB1Q15047 1291 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 ZKSCAN8Q15776 578 aaPredicted RBP20.71■□□□□ 0.91
LIMS2-207ENST00000409808 MAP3K21Q5TCX8 1036 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 TAF2Q6P1X5 1199 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 CENPUQ71F23 418 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 RAB3IPQ96QF0 476 aaPredicted RBP20.71■□□□□ 0.91
LIMS2-207ENST00000409808 RNF39Q9H2S5 420 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 SSU72Q9NP77 194 aaKnown RBP20.71■□□□□ 0.91
LIMS2-207ENST00000409808 KLK14Q9P0G3 267 aa20.71■□□□□ 0.91
LIMS2-207ENST00000409808 EFR3BQ9Y2G0 817 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms