RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 NCANO14594 1321 aa23.64■■□□□ 1.38
PTCD3-203ENST00000409783 SOBPA7XYQ1 873 aa23.64■■□□□ 1.37
PTCD3-203ENST00000409783 PI4K2BG5E9Z4 385 aa23.64■■□□□ 1.37
PTCD3-203ENST00000409783 FOXN3O00409 490 aaPredicted RBP23.64■■□□□ 1.37
PTCD3-203ENST00000409783 UCHL3P15374 230 aa23.64■■□□□ 1.37
PTCD3-203ENST00000409783 YWHAQP27348 245 aa23.64■■□□□ 1.37
PTCD3-203ENST00000409783 WEE1P30291 646 aa23.64■■□□□ 1.37
PTCD3-203ENST00000409783 TAF10Q12962 218 aa23.64■■□□□ 1.37
PTCD3-203ENST00000409783 LRSAM1Q6UWE0 723 aa23.64■■□□□ 1.37
PTCD3-203ENST00000409783 MON1AQ86VX9 555 aa23.64■■□□□ 1.37
PTCD3-203ENST00000409783 SLC44A3Q8N4M1 653 aa23.64■■□□□ 1.37
PTCD3-203ENST00000409783 ERGIC2Q96RQ1 377 aa23.64■■□□□ 1.37
PTCD3-203ENST00000409783 PLA2G2FQ9BZM2 168 aa23.64■■□□□ 1.37
PTCD3-203ENST00000409783 UBXN6Q9BZV1 441 aa23.64■■□□□ 1.37
PTCD3-203ENST00000409783 ACP6Q9NPH0 428 aa23.64■■□□□ 1.37
PTCD3-203ENST00000409783 RTN4Q9NQC3 1192 aaKnown RBP23.64■■□□□ 1.37
PTCD3-203ENST00000409783 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.64■■□□□ 1.37
PTCD3-203ENST00000409783 TULP2O00295 520 aa23.63■■□□□ 1.37
PTCD3-203ENST00000409783 EPHB6O15197 1021 aa23.63■■□□□ 1.37
PTCD3-203ENST00000409783 TEX33O43247 280 aa23.63■■□□□ 1.37
PTCD3-203ENST00000409783 DCXO43602 365 aa23.63■■□□□ 1.37
PTCD3-203ENST00000409783 ECI2O75521 394 aa23.63■■□□□ 1.37
PTCD3-203ENST00000409783 DDX6P26196 483 aaKnown RBP eCLIP23.63■■□□□ 1.37
PTCD3-203ENST00000409783 UBXN1Q04323 297 aa23.63■■□□□ 1.37
PTCD3-203ENST00000409783 PDE4CQ08493 712 aa23.63■■□□□ 1.37
PTCD3-203ENST00000409783 IFRD2Q12894 506 aaPredicted RBP23.63■■□□□ 1.37
PTCD3-203ENST00000409783 TDGQ13569 410 aa23.63■■□□□ 1.37
PTCD3-203ENST00000409783 SYCP1Q15431 976 aa23.63■■□□□ 1.37
PTCD3-203ENST00000409783 TXNDC8Q6A555 127 aa23.63■■□□□ 1.37
PTCD3-203ENST00000409783 MRPS31Q92665 395 aaKnown RBP23.63■■□□□ 1.37
PTCD3-203ENST00000409783 RSPRY1Q96DX4 576 aa23.63■■□□□ 1.37
PTCD3-203ENST00000409783 KXD1Q9BQD3 176 aa23.63■■□□□ 1.37
PTCD3-203ENST00000409783 SLITRK6Q9H5Y7 841 aa23.63■■□□□ 1.37
PTCD3-203ENST00000409783 TRIOO75962 3097 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 ZNF840PA6NDX5 716 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 ZDHHC11BP0C7U3 371 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 PNMA6AP0CW24 399 aaPredicted RBP23.62■■□□□ 1.37
PTCD3-203ENST00000409783 RFX1P22670 979 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 VIPR2P41587 438 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 KIF11P52732 1056 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 BCAT1P54687 386 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 DRAP1Q14919 205 aaPredicted RBP23.62■■□□□ 1.37
PTCD3-203ENST00000409783 STILQ15468 1287 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 RAB41Q5JT25 222 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 PIGZQ86VD9 579 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 ARID3BQ8IVW6 561 aaPredicted RBP23.62■■□□□ 1.37
PTCD3-203ENST00000409783 FAM71AQ8IYT1 594 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 CMTM8Q8IZV2 173 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 MAB21L3Q8N8X9 362 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 UBA3Q8TBC4 463 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 OVCA2Q8WZ82 227 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 FBXO32Q969P5 355 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 ELSPBP1Q96BH3 223 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 NAP1L5Q96NT1 182 aaPredicted RBP23.62■■□□□ 1.37
PTCD3-203ENST00000409783 SLC22A12Q96S37 553 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 EPHX3Q9H6B9 360 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 ZMYM5Q9UJ78 669 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 USP3Q9Y6I4 520 aa23.62■■□□□ 1.37
PTCD3-203ENST00000409783 A0A1B0GTH6 734 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 C2orf78A6NCI8 922 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 XPO1O14980 1071 aaKnown RBP23.61■■□□□ 1.37
PTCD3-203ENST00000409783 CYP26A1O43174 497 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 PRAMEF12O95522 483 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 CLCN1P35523 988 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 PPP3CCP48454 512 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 PGFP49763 221 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 ZXDAP98168 799 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 BST2Q10589 180 aaKnown RBP23.61■■□□□ 1.37
PTCD3-203ENST00000409783 SNX30Q5VWJ9 437 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 GPIHBP1Q8IV16 184 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 ZNF606Q8WXB4 792 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 SLITRK1Q96PX8 696 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 TSPY26PQ9H489 355 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 ZFP14Q9HCL3 533 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 FAM207AQ9NSI2 230 aaPredicted RBP23.61■■□□□ 1.37
PTCD3-203ENST00000409783 TRPM5Q9NZQ8 1165 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 HESX1Q9UBX0 185 aa23.61■■□□□ 1.37
PTCD3-203ENST00000409783 HELZP42694 1942 aaKnown RBP23.61■■□□□ 1.37
PTCD3-203ENST00000409783 KIF26AQ9ULI4 1882 aaPredicted RBP23.6■■□□□ 1.37
PTCD3-203ENST00000409783 TECTAO75443 2155 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 NARSO43776 548 aaKnown RBP23.6■■□□□ 1.37
PTCD3-203ENST00000409783 SETSIPP0DME0 302 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 USP8P40818 1118 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 PLA2G4AP47712 749 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 ZNF445P59923 1031 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 RAPGEF1Q13905 1077 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 PDZD8Q8NEN9 1154 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 SLC35F5Q8WV83 523 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 EDAQ92838 391 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 LRRC3BQ96PB8 259 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 CYP2S1Q96SQ9 504 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 STK33Q9BYT3 514 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 FBXO44Q9H4M3 255 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 GMIPQ9P107 970 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 CHORDC1Q9UHD1 332 aaPredicted RBP23.6■■□□□ 1.37
PTCD3-203ENST00000409783 DUSP12Q9UNI6 340 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 SCML2Q9UQR0 700 aa23.6■■□□□ 1.37
PTCD3-203ENST00000409783 GABBR2O75899 941 aa23.59■■□□□ 1.37
PTCD3-203ENST00000409783 CFHP08603 1231 aa23.59■■□□□ 1.37
PTCD3-203ENST00000409783 ALADP13716 330 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms