RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.71□□□□□ -1.025e-7■□□□□ 8.7
SCN9A-203ENST00000409672 PTCH1Q13635 1447 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 TRBV23OR9-2A0A075B6M9 112 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 VPS26AO75436 327 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 TAP1Q03518 808 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 CUL4AQ13619 759 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 SLC44A4Q53GD3 710 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 ATP6V1C2Q8NEY4 427 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 TADA1Q96BN2 335 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 NSUN4Q96CB9 384 aaKnown RBP8.71□□□□□ -1.02
SCN9A-203ENST00000409672 IARS2Q9NSE4 1012 aaKnown RBP8.71□□□□□ -1.02
SCN9A-203ENST00000409672 LOC100653049A0A140TA62 436 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 KRT34O76011 436 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 IL18RAPO95256 599 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 PGK1P00558 417 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 IGKV5-2P06315 115 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 CYP2F1P24903 491 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 KCNJ1P48048 391 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 NEK2P51955 445 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 FBXO2Q9UK22 296 aaPredicted RBP8.7□□□□□ -1.02
SCN9A-203ENST00000409672 NT5C1B-RDH14C9J2C7 533 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 TGM2P21980 687 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 ABCE1P61221 599 aaKnown RBP8.7□□□□□ -1.02
SCN9A-203ENST00000409672 INSCQ1MX18 579 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 SETMARQ53H47 684 aaPredicted RBP8.7□□□□□ -1.02
SCN9A-203ENST00000409672 VSTM4Q8IW00 320 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 GMCL1Q96IK5 515 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 MXRA8Q9BRK3 442 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 ADAM21Q9UKJ8 722 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 A0A087WZ62 844 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 PTGER2P43116 358 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 RASAL3Q86YV0 1011 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 KCNS3Q9BQ31 491 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 FDXACB1Q9BRP7 624 aaPredicted RBP8.7□□□□□ -1.02
SCN9A-203ENST00000409672 CLPBQ9H078 707 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 TFR2Q9UP52 801 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 H7C1W4 665 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 PDHBP11177 359 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 OR1E1P30953 314 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 USP11P51784 963 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 CCNG1P51959 295 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 KCNK10P57789 538 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 UGT3A1Q6NUS8 523 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 C7orf61Q8IZ16 206 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 ST13P5Q8NFI4 369 aaPredicted RBP8.7□□□□□ -1.02
SCN9A-203ENST00000409672 PLEKHF1Q96S99 279 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 MYO9BQ13459 2157 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 PSMD3O43242 534 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 IL1BP01584 269 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 HDAC4P56524 1084 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 VSNL1P62760 191 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 ZNF200P98182 395 aaPredicted RBP8.7□□□□□ -1.02
SCN9A-203ENST00000409672 RCOR2Q8IZ40 523 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 RNPC3Q96LT9 517 aaKnown RBP8.7□□□□□ -1.02
SCN9A-203ENST00000409672 RPRD1BQ9NQG5 326 aaKnown RBP8.7□□□□□ -1.02
SCN9A-203ENST00000409672 TEX28O15482 410 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 ADORA2AP29274 412 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 SLC39A12Q504Y0 691 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 ITIH5Q86UX2 942 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 USP7Q93009 1102 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 YIPF3Q9GZM5 350 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 APEX2Q9UBZ4 518 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 MYMKA6NI61 221 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 PTK7Q13308 1070 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 TOB2Q14106 344 aaPredicted RBP8.7□□□□□ -1.02
SCN9A-203ENST00000409672 INPP5AQ14642 412 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 LPCAT1Q8NF37 534 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 NDEL1Q9GZM8 345 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 INTS13Q9NVM9 706 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 NEU2Q9Y3R4 380 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 JCADQ9P266 1359 aa8.7□□□□□ -1.02
SCN9A-203ENST00000409672 DNMT1P26358 1616 aaKnown RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 A0A1W2PQ27 194 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 A0A1W2PQ64 194 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 A0A1W2PQD8 194 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 XPO1O14980 1071 aaKnown RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 CST8O60676 142 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 TOMM70O94826 608 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 POLR2EP19388 210 aaKnown RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 LIFRP42702 1097 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 FOXO4P98177 505 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 ZNF543Q08ER8 600 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 PHF21BQ96EK2 531 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 PEX1O43933 1283 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 FAM107AO95990 144 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 TFE3P19532 575 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 EPS8Q12929 822 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 PROM2Q8N271 834 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 ROGDIQ9GZN7 287 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 SPATS2LQ9NUQ6 558 aaKnown RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 GID8Q9NWU2 228 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 PRKAG3Q9UGI9 489 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 SHOC2Q9UQ13 582 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 PLEKHG1Q9ULL1 1385 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 CCDC130P13994 396 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 ITGAXP20702 1163 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 POU6F1Q14863 301 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 C12orf60Q5U649 245 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 TYW3Q6IPR3 259 aaKnown RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 FBXL19Q6PCT2 694 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms