RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 GOLGA8JA6NMD2 632 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 UPK3BL1B0FP48 263 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 UPK3BL2E5RIL1 263 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 H3BQV1 296 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 SCAMP3O14828 347 aaKnown RBP18.06■□□□□ 0.48
SCRN1-203ENST00000409570 ADAM23O75077 832 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 KAT7O95251 611 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 OLFM2O95897 454 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 LDHAP00338 332 aaKnown RBP18.06■□□□□ 0.48
SCRN1-203ENST00000409570 APODP05090 189 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 GRIK1P39086 918 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 EIF2DP41214 584 aaKnown RBP18.06■□□□□ 0.48
SCRN1-203ENST00000409570 KIR2DL1P43626 348 aaPredicted RBP18.06■□□□□ 0.48
SCRN1-203ENST00000409570 C8orf34Q49A92 452 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 L1TD1Q5T7N2 865 aaKnown RBP18.06■□□□□ 0.48
SCRN1-203ENST00000409570 PEAR1Q5VY43 1037 aaPredicted RBP18.06■□□□□ 0.48
SCRN1-203ENST00000409570 RHBDF2Q6PJF5 856 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 DPH6Q7L8W6 267 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 CEP295NLQ96MC4 621 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 ACCSQ96QU6 501 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 MTMR12Q9C0I1 747 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 MRPL44Q9H9J2 332 aaKnown RBP18.06■□□□□ 0.48
SCRN1-203ENST00000409570 PDE11AQ9HCR9 933 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 POLMQ9NP87 494 aaPredicted RBP18.06■□□□□ 0.48
SCRN1-203ENST00000409570 ZDHHC4Q9NPG8 344 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 TBC1D7Q9P0N9 293 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 PILRBQ9UKJ0 227 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 CDH9Q9ULB4 789 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 LHX6Q9UPM6 363 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 CPQQ9Y646 472 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 PLXNB3Q9ULL4 1909 aa18.06■□□□□ 0.48
SCRN1-203ENST00000409570 MYH10P35580 1976 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 GARTP22102 1010 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 ITPKAP23677 461 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 GJB2P29033 226 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 SPDYCQ5MJ68 293 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 EOGTQ5NDL2 527 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 LYSMD4Q5XG99 296 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 LMBRD2Q68DH5 695 aaPredicted RBP18.05■□□□□ 0.48
SCRN1-203ENST00000409570 USP49Q70CQ1 688 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 HMGB4Q8WW32 186 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 DNAJC19Q96DA6 116 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 CBWD1Q9BRT8 395 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 FSCN3Q9NQT6 498 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 SMPD4Q9NXE4 827 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 BCCIPQ9P287 314 aaKnown RBP eCLIP18.05■□□□□ 0.48
SCRN1-203ENST00000409570 SEL1LQ9UBV2 794 aa18.05■□□□□ 0.48
SCRN1-203ENST00000409570 SLC9A3R1O14745 358 aaPredicted RBP18.04■□□□□ 0.48
SCRN1-203ENST00000409570 BMP15O95972 392 aa18.04■□□□□ 0.48
SCRN1-203ENST00000409570 OAS1P00973 400 aaKnown RBP18.04■□□□□ 0.48
SCRN1-203ENST00000409570 TMEM191BP0C7N4 346 aa18.04■□□□□ 0.48
SCRN1-203ENST00000409570 DPP6P42658 865 aa18.04■□□□□ 0.48
SCRN1-203ENST00000409570 CASP5P51878 434 aa18.04■□□□□ 0.48
SCRN1-203ENST00000409570 SIM1P81133 766 aaPredicted RBP18.04■□□□□ 0.48
SCRN1-203ENST00000409570 KDSRQ06136 332 aa18.04■□□□□ 0.48
SCRN1-203ENST00000409570 RESTQ13127 1097 aa18.04■□□□□ 0.48
SCRN1-203ENST00000409570 BYSLQ13895 437 aaKnown RBP18.04■□□□□ 0.48
SCRN1-203ENST00000409570 PHTF2Q8N3S3 785 aa18.04■□□□□ 0.48
SCRN1-203ENST00000409570 EPSTI1Q96J88 318 aa18.04■□□□□ 0.48
SCRN1-203ENST00000409570 PCIF1Q9H4Z3 704 aa18.04■□□□□ 0.48
SCRN1-203ENST00000409570 ARHGEF4Q9NR80 690 aa18.04■□□□□ 0.48
SCRN1-203ENST00000409570 ACACAQ13085 2346 aa18.04■□□□□ 0.48
SCRN1-203ENST00000409570 PTPRJQ12913 1337 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 TCRBV21S2A2A0A5A6 115 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 TAF4O00268 1085 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 GCNT3O95395 438 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 CFIP05156 583 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 PDGFRBP09619 1106 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 GAP43P17677 238 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 WARSP23381 471 aaKnown RBP18.03■□□□□ 0.48
SCRN1-203ENST00000409570 ANXA13P27216 316 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 HOXD12P35452 270 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 GRIA2P42262 883 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 TNFRSF4P43489 277 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 PPP3CCP48454 512 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 FAM193AP78312 1265 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 NOP14P78316 857 aaKnown RBP18.03■□□□□ 0.48
SCRN1-203ENST00000409570 CYP27A1Q02318 531 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 SF3A1Q15459 793 aaKnown RBP18.03■□□□□ 0.48
SCRN1-203ENST00000409570 MAPRE1Q15691 268 aaKnown RBP18.03■□□□□ 0.48
SCRN1-203ENST00000409570 DUOXA1Q1HG43 343 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 OR5B17Q8NGF7 314 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 PCED1BQ96HM7 432 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 HPDLQ96IR7 371 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 FGFBP2Q9BYJ0 223 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 INTS13Q9NVM9 706 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 CFAP97Q9P2B7 532 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 SLC6A14Q9UN76 642 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 NME7Q9Y5B8 376 aa18.03■□□□□ 0.48
SCRN1-203ENST00000409570 FAM221BA6H8Z2 402 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 F8VP50 259 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 TRIM66O15016 1216 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 ADH1CP00326 375 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 ADH5P11766 374 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 TAF10Q12962 218 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 MYO1EQ12965 1108 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 SYCP3Q8IZU3 236 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 PGBD3Q8N328 593 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 MYCBPAPQ8TBZ2 947 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 NOC3LQ8WTT2 800 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms