RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 RNF135Q8IUD6 432 aa17.45■□□□□ 0.38
TSPAN4-208ENST00000409531 LRRC8AQ8IWT6 810 aa17.45■□□□□ 0.38
TSPAN4-208ENST00000409531 TCEAL8Q8IYN2 117 aa17.45■□□□□ 0.38
TSPAN4-208ENST00000409531 ATAD1Q8NBU5 361 aa17.45■□□□□ 0.38
TSPAN4-208ENST00000409531 SLC7A14Q8TBB6 771 aa17.45■□□□□ 0.38
TSPAN4-208ENST00000409531 CEP295NLQ96MC4 621 aa17.45■□□□□ 0.38
TSPAN4-208ENST00000409531 NOX5Q96PH1 765 aa17.45■□□□□ 0.38
TSPAN4-208ENST00000409531 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.45■□□□□ 0.38
TSPAN4-208ENST00000409531 NHEJ1Q9H9Q4 299 aaPredicted RBP17.45■□□□□ 0.38
TSPAN4-208ENST00000409531 DMAP1Q9NPF5 467 aaPredicted RBP17.45■□□□□ 0.38
TSPAN4-208ENST00000409531 PATJQ8NI35 1801 aa17.45■□□□□ 0.38
TSPAN4-208ENST00000409531 PRRG1O14668 218 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 AKR1B10O60218 316 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 PLEKP08567 350 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 HAPLN1P10915 354 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 CHRNB2P17787 502 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 CYP2F1P24903 491 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 CYLC1P35663 651 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 GRIK1P39086 918 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 SNX16P57768 344 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 RPL10AP62906 217 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 DUSP4Q13115 394 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 MGAT5BQ3V5L5 792 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 PKDCCQ504Y2 493 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 TTC30AQ86WT1 665 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 PLCD3Q8N3E9 789 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 MSANTD4Q8NCY6 345 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 KHSRPQ92945 711 aaKnown RBP eCLIP17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 CHP1Q99653 195 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 UBXN6Q9BZV1 441 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 CYP4F11Q9HBI6 524 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 CSNK1G1Q9HCP0 422 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 PNPLA8Q9NP80 782 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 ADAMTS1Q9UHI8 967 aa17.44■□□□□ 0.38
TSPAN4-208ENST00000409531 PI4K2BG5E9Z4 385 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 XPO1O14980 1071 aaKnown RBP17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 XYLBO75191 536 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 CYP1A1P04798 512 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 POU2F2P09086 479 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 GZMAP12544 262 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 CDH5P33151 784 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 GPD2P43304 727 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 PDE4CQ08493 712 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 SLC18A3Q16572 532 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 DENND1BQ6P3S1 775 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 CLEC20AQ6ZU45 233 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 OTOP3Q7RTS5 596 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 PASD1Q8IV76 773 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 UBA3Q8TBC4 463 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 STK32AQ8WU08 396 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 ACSF2Q96CM8 615 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 C8orf48Q96LL4 319 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 SEPT5Q99719 369 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 MIS12Q9H081 205 aa17.43■□□□□ 0.38
TSPAN4-208ENST00000409531 GREB1Q4ZG55 1949 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 C2CD4DB7Z1M9 353 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 CCL16O15467 120 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 IPO7O95373 1038 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 SEC24AO95486 1093 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 VNN2O95498 520 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 CFHP08603 1231 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 ALADP13716 330 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 SP100P23497 879 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 ACADSBP45954 432 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 NSFP46459 744 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 PLA2G4AP47712 749 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 ALDH1A3P47895 512 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 KIF11P52732 1056 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 MAP3K7CLP57077 242 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 NOMO3P69849 1222 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 PLD1Q13393 1074 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 CLEC16AQ2KHT3 1053 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 ASTE1Q2TB18 679 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 TMEM139Q8IV31 216 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 SCN4BQ8IWT1 228 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 ZDHHC14Q8IZN3 488 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 SLC30A5Q8TAD4 765 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 SLC35F5Q8WV83 523 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 SECISBP2LQ93073 1101 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 HSFY1Q96LI6 401 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 SMOQ99835 787 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 C1QTNF1Q9BXJ1 281 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 EPHX3Q9H6B9 360 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 CYLDQ9NQC7 956 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 SLC27A5Q9Y2P5 690 aa17.42■□□□□ 0.38
TSPAN4-208ENST00000409531 ZNF638Q14966 1978 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 CLUHO75153 1309 aa17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 F8VP50 259 aa17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 DDX3XO00571 662 aaKnown RBP eCLIP17.41■□□□□ 0.386e-7■■■□□ 18.5
TSPAN4-208ENST00000409531 ARHGAP6O43182 974 aa17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 LRG1P02750 347 aa17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 UNGP13051 313 aaPredicted RBP17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 CDR1P51861 262 aa17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 CENPCQ03188 943 aa17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 NAA35Q5VZE5 725 aa17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 GRASPQ7Z6J2 395 aaPredicted RBP17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 TDRD5Q8NAT2 981 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 C1orf131Q8NDD1 294 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 SPATA17Q96L03 361 aa17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 KCNK16Q96T55 309 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms