RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 DNAJB2P25686 324 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 HSPA9P38646 679 aaKnown RBP17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 PTENP60484 403 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 ACTN3Q08043 901 aaPredicted RBP17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 FAM172AQ8WUF8 416 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 FAM124BQ9H5Z6 455 aaPredicted RBP17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 SLC25A13Q9UJS0 675 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 DRG1Q9Y295 367 aaKnown RBP17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 CAPN6Q9Y6Q1 641 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 SNRPAP09012 282 aaKnown RBP17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 FGFR4P22455 802 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 TKTL1P51854 596 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 BMT2Q1RMZ1 405 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 MDH1BQ5I0G3 518 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 ADAM2Q99965 735 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 ANKZF1Q9H8Y5 726 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 FIS1Q9Y3D6 152 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 A0A0G2JND7 137 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 C2CD2LO14523 706 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 GNGT2O14610 69 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 GLRA2P23416 452 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 SLC12A1Q13621 1099 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 RETSATQ6NUM9 610 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 ACTRT1Q8TDG2 376 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 AGAP3Q96P47 875 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 LRRC37BQ96QE4 947 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 THG1LQ9NWX6 298 aaKnown RBP17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 GIT1Q9Y2X7 761 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 CES2O00748 559 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 CA12O43570 354 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 FUT2Q10981 343 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 TWF1Q12792 350 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 MORF4L2Q15014 288 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 SYTL3Q4VX76 610 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 EPC2Q52LR7 807 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 CCDC149Q6ZUS6 474 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 ZNF541Q9H0D2 1346 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 FZD9O00144 591 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 TLR2O60603 784 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 HNRNPCL1O60812 293 aaKnown RBP17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 ITGB5P18084 799 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 PPM1AP35813 382 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 NDST1P52848 882 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 PAN2Q504Q3 1202 aaKnown RBP17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 OR2W6PQ8NHA6 318 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 DUSP9Q99956 384 aaKnown RBP17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 PPARGC1AQ9UBK2 798 aaKnown RBP17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 SLC45A1Q9Y2W3 748 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 C2orf81A6NN90 581 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 STX7O15400 261 aaKnown RBP17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 IRF1P10914 325 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 PYGBP11216 843 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 YWHAZP63104 245 aaKnown RBP17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 MRNIPQ6NTE8 343 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 SLAIN1Q8ND83 568 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 PDZD8Q8NEN9 1154 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 CLMNQ96JQ2 1002 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 HSFY1Q96LI6 401 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 WWP1Q9H0M0 922 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 KLHL11Q9NVR0 708 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 SCOCQ9UIL1 159 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 ASMTLO95671 621 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 LMNAP02545 664 aaKnown RBP17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 TGM2P21980 687 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 CASP2P42575 452 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 CORO7P57737 925 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 ABCE1P61221 599 aaKnown RBP17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 CCNG2Q16589 344 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 TSPYL2Q9H2G4 693 aaPredicted RBP17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 TRABDQ9H4I3 376 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 AP4E1Q9UPM8 1137 aa17.43■□□□□ 0.38
PCDHA13-202ENST00000409494 H3BQF6 201 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 AKT1P31749 480 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 MAGEA4P43358 317 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 PSEN1P49768 467 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 SMARCB1Q12824 385 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 DEFB128Q7Z7B8 93 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 MCOLN2Q8IZK6 566 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 TMEM161BQ8NDZ6 487 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 RXFP2Q8WXD0 754 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 FGD4Q96M96 766 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 CDY2AQ9Y6F7 541 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 PEAK1Q9H792 1746 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 SLC12A8A0AV02 714 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 ZBTB22O15209 634 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 RECQL4O94761 1208 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 ASS1P00966 412 aaKnown RBP17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 RRM1P23921 792 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 YWHAQP27348 245 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 DDX42Q86XP3 938 aaKnown RBP eCLIP17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 MFN1Q8IWA4 741 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 STAMBPL1Q96FJ0 436 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 SPATS2LQ9NUQ6 558 aaKnown RBP17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 HACD3Q9P035 362 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 TSPAN16Q9UKR8 245 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 RAB21Q9UL25 225 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 USP18Q9UMW8 372 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 NID2Q14112 1375 aa17.42■□□□□ 0.38
PCDHA13-202ENST00000409494 CASTOR2A6NHX0 329 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms