RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 SPPL3Q8TCT6 385 aa17.72■□□□□ 0.43
SSB-202ENST00000409333 SPPL2BQ8TCT7 592 aa17.72■□□□□ 0.43
SSB-202ENST00000409333 MCEEQ96PE7 176 aa17.72■□□□□ 0.43
SSB-202ENST00000409333 LRRC4Q9HBW1 653 aa17.72■□□□□ 0.43
SSB-202ENST00000409333 MRPL47Q9HD33 250 aaKnown RBP17.72■□□□□ 0.43
SSB-202ENST00000409333 ABCB6Q9NP58 842 aa17.72■□□□□ 0.43
SSB-202ENST00000409333 METTL5Q9NRN9 209 aaKnown RBP17.72■□□□□ 0.43
SSB-202ENST00000409333 WDR35Q9P2L0 1181 aa17.72■□□□□ 0.43
SSB-202ENST00000409333 ANAPC7Q9UJX3 599 aa17.72■□□□□ 0.43
SSB-202ENST00000409333 LZTS1Q9Y250 596 aa17.72■□□□□ 0.43
SSB-202ENST00000409333 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.71■□□□□ 0.43
SSB-202ENST00000409333 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.71■□□□□ 0.43
SSB-202ENST00000409333 CAPN15O75808 1086 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 SOAT2O75908 522 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 ACADSBP45954 432 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 NDUFV1P49821 464 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 TKTL1P51854 596 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 ADCY1Q08828 1119 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 RAB41Q5JT25 222 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 FAM102AQ5T9C2 384 aaPredicted RBP17.71■□□□□ 0.43
SSB-202ENST00000409333 SDHAF4Q5VUM1 108 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 VSTM1Q6UX27 236 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 TMC7Q7Z402 723 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 SCN4BQ8IWT1 228 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 LRRC57Q8N9N7 239 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 STKLD1Q8NE28 680 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 TRIM58Q8NG06 486 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 JOSD2Q8TAC2 188 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 FEZF2Q8TBJ5 459 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 POF1BQ8WVV4 589 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 ALS2CR12Q96Q35 445 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 TGS1Q96RS0 853 aaKnown RBP17.71■□□□□ 0.43
SSB-202ENST00000409333 TCF25Q9BQ70 676 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 SELENOOQ9BVL4 669 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 UBXN6Q9BZV1 441 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 DNAI1Q9UI46 699 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 TRANK1O15050 2925 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.71■□□□□ 0.43
SSB-202ENST00000409333 TEX28O15482 410 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 OBSL1O75147 1896 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 ABLIM3O94929 683 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 BMP8BP34820 402 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 MAGEA11P43364 429 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 SNX16P57768 344 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 SLC6A3Q01959 620 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 SMARCB1Q12824 385 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 DUSP4Q13115 394 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 TAF5Q15542 800 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 IFI16Q16666 785 aaKnown RBP17.71■□□□□ 0.43
SSB-202ENST00000409333 PTPROQ16827 1216 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 DDR2Q16832 855 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 GPR65Q8IYL9 337 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 C2orf15Q8WU43 125 aaKnown RBP17.71■□□□□ 0.43
SSB-202ENST00000409333 NDRG1Q92597 394 aaKnown RBP17.71■□□□□ 0.43
SSB-202ENST00000409333 SEPT5Q99719 369 aaPredicted RBP17.71■□□□□ 0.43
SSB-202ENST00000409333 C11orf84Q9BUA3 381 aaPredicted RBP17.71■□□□□ 0.43
SSB-202ENST00000409333 NKX2-4Q9H2Z4 354 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 CERS4Q9HA82 394 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 RXFP1Q9HBX9 757 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 ENTPD7Q9NQZ7 604 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 FNIP2Q9P278 1114 aa17.71■□□□□ 0.43
SSB-202ENST00000409333 SIGLEC16A6NMB1 481 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 TMEM110-MUSTN1A8MSY1 372 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 GRM6O15303 877 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 GRAP2O75791 330 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 RB1P06400 928 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 CNPP09543 421 aaKnown RBP17.7■□□□□ 0.42
SSB-202ENST00000409333 KRT3P12035 628 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 MGAT5BQ3V5L5 792 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 PLPP4Q5VZY2 271 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 DCUN1D2Q6PH85 259 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 TDHQ8IZJ6 230 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 SIX6OS1Q8N1H7 587 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 EMC1Q8N766 993 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 ZNF461Q8TAF7 563 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 ULBP1Q9BZM6 244 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 PNPLA8Q9NP80 782 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 TLR9Q9NR96 1032 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.7■□□□□ 0.422e-7■□□□□ 9.6
SSB-202ENST00000409333 SSX2IPQ9Y2D8 614 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 HYOU1Q9Y4L1 999 aa17.7■□□□□ 0.42
SSB-202ENST00000409333 TMEM191CA6NGB0 347 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 KIF2AO00139 706 aaPredicted RBP17.69■□□□□ 0.42
SSB-202ENST00000409333 TRIM66O15016 1216 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 CXCL14O95715 111 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 FTCDO95954 541 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 HAPLN1P10915 354 aaPredicted RBP17.69■□□□□ 0.42
SSB-202ENST00000409333 RFC1P35251 1148 aaPredicted RBP17.69■□□□□ 0.42
SSB-202ENST00000409333 RGS19P49795 217 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 ERVK-21P61565 698 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 OGDHQ02218 1023 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 ZNF252P-AS1Q0IIN9 211 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 RAB33AQ14088 237 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 MESDQ14696 234 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 DAAM2Q86T65 1068 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 CPNE8Q86YQ8 564 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 ZDHHC17Q8IUH5 632 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 GPR152Q8TDT2 470 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 ZNF592Q92610 1267 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 KHSRPQ92945 711 aaKnown RBP eCLIP17.69■□□□□ 0.421e-7■■□□□ 13.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms