RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 PER2O15055 1255 aa21.58■■□□□ 1.05
VSX1-203ENST00000409285 C8AP07357 584 aa21.58■■□□□ 1.05
VSX1-203ENST00000409285 EPCAMP16422 314 aa21.58■■□□□ 1.05
VSX1-203ENST00000409285 ALDH1A3P47895 512 aa21.58■■□□□ 1.05
VSX1-203ENST00000409285 CDR1P51861 262 aa21.58■■□□□ 1.05
VSX1-203ENST00000409285 GSCP56915 257 aaPredicted RBP21.58■■□□□ 1.05
VSX1-203ENST00000409285 MTF1Q14872 753 aa21.58■■□□□ 1.05
VSX1-203ENST00000409285 PTPN20Q4JDL3 420 aa21.58■■□□□ 1.05
VSX1-203ENST00000409285 SCN4BQ8IWT1 228 aa21.58■■□□□ 1.05
VSX1-203ENST00000409285 SCML4Q8N228 414 aa21.58■■□□□ 1.05
VSX1-203ENST00000409285 SLC7A14Q8TBB6 771 aa21.58■■□□□ 1.05
VSX1-203ENST00000409285 IPO4Q8TEX9 1081 aaKnown RBP21.58■■□□□ 1.05
VSX1-203ENST00000409285 MYLIPQ8WY64 445 aa21.58■■□□□ 1.05
VSX1-203ENST00000409285 COMMD8Q9NX08 183 aa21.58■■□□□ 1.05
VSX1-203ENST00000409285 IL37Q9NZH6 218 aa21.58■■□□□ 1.05
VSX1-203ENST00000409285 FAM92AA1XBS5 289 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 IPO7O95373 1038 aaKnown RBP21.58■■□□□ 1.04
VSX1-203ENST00000409285 PTP4A2Q12974 167 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 ADGRE1Q14246 886 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 DDR2Q16832 855 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 TCEAL5Q5H9L2 206 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 CCDC122Q5T0U0 273 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 RBM23Q86U06 439 aaKnown RBP21.58■■□□□ 1.04
VSX1-203ENST00000409285 ERICH1Q86X53 443 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 NUP93Q8N1F7 819 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 EFHBQ8N7U6 833 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 TRIM11Q96F44 468 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 TTLL2Q9BWV7 592 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 ZDHHC7Q9NXF8 308 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 EHD2Q9NZN4 543 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 STRIP2Q9ULQ0 834 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 ASB3Q9Y575 518 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 USP3Q9Y6I4 520 aa21.58■■□□□ 1.04
VSX1-203ENST00000409285 ZMYND10O75800 440 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 GABBR2O75899 941 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 SOAT2O75908 522 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 FTLP02792 175 aaPredicted RBP21.57■■□□□ 1.04
VSX1-203ENST00000409285 CALB1P05937 261 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 HNRNPA1P09651 372 aaKnown RBP eCLIP21.57■■□□□ 1.04
VSX1-203ENST00000409285 SPATA31D3P0C874 917 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 GPR15P49685 360 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 SLC5A3P53794 718 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 HYAL1Q12794 435 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 COL19A1Q14993 1142 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 SPA17Q15506 151 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 SPATA31D4Q6ZUB0 917 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 DENND5BQ6ZUT9 1274 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 ZDHHC17Q8IUH5 632 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 MCOLN2Q8IZK6 566 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 CASP10Q92851 521 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 TRMT2BQ96GJ1 504 aaKnown RBP21.57■■□□□ 1.04
VSX1-203ENST00000409285 MYRFLQ96LU7 910 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 LUC7LQ9NQ29 371 aaKnown RBP21.57■■□□□ 1.04
VSX1-203ENST00000409285 CNGB3Q9NQW8 809 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 ST7Q9NRC1 585 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 DZANK1Q9NVP4 752 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 INTUQ9ULD6 942 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 DENND4AQ7Z401 1863 aa21.57■■□□□ 1.04
VSX1-203ENST00000409285 E5RJQ4 531 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 FBXO21O94952 628 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 RTN3O95197 1032 aaPredicted RBP21.56■■□□□ 1.04
VSX1-203ENST00000409285 MYBL1P10243 752 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 FOSL2P15408 326 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 SCNN1AP37088 669 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 TWF1Q12792 350 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 VEPH1Q14D04 833 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 HS1BP3Q53T59 392 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 PM20D1Q6GTS8 502 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 GPRIN1Q7Z2K8 1008 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 ITIH5Q86UX2 942 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 VN1R2Q8NFZ6 395 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 PSMG2Q969U7 264 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 C18orf8Q96DM3 657 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 FBXO44Q9H4M3 255 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 LRRC4Q9HBW1 653 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 ADAM22Q9P0K1 906 aa21.56■■□□□ 1.04
VSX1-203ENST00000409285 HELZP42694 1942 aaKnown RBP21.56■■□□□ 1.04
VSX1-203ENST00000409285 ANKRD62A6NC57 917 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 NCK2O43639 380 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 LRG1P02750 347 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 CSH1P0DML2 217 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 CSH2P0DML3 217 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 SRGAP2BP0DMP2 458 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 RGS7P49802 495 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 TKTL1P51854 596 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 EPHB3P54753 998 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 KRT83P78385 493 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 ADIGQ0VDE8 80 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 PPM1LQ5SGD2 360 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 MMS22LQ6ZRQ5 1243 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 CMASQ8NFW8 434 aaPredicted RBP21.55■■□□□ 1.04
VSX1-203ENST00000409285 C11orf70Q9BRQ4 267 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 SYNCQ9H7C4 482 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 WDR35Q9P2L0 1181 aa21.55■■□□□ 1.04
VSX1-203ENST00000409285 REXO2Q9Y3B8 237 aaKnown RBP21.55■■□□□ 1.04
VSX1-203ENST00000409285 SLC38A8A6NNN8 435 aa21.54■■□□□ 1.04
VSX1-203ENST00000409285 TMCO5BA8MYB1 307 aa21.54■■□□□ 1.04
VSX1-203ENST00000409285 GLP2RO95838 553 aa21.54■■□□□ 1.04
VSX1-203ENST00000409285 ERBB2P04626 1255 aa21.54■■□□□ 1.04
VSX1-203ENST00000409285 IGFBP4P22692 258 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms