RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 CALR3Q96L12 384 aaKnown RBP13.74□□□□□ -0.21
LIMS2-203ENST00000409254 PGLYRP2Q96PD5 576 aa13.74□□□□□ -0.21
LIMS2-203ENST00000409254 CYP4F11Q9HBI6 524 aa13.74□□□□□ -0.21
LIMS2-203ENST00000409254 AVENQ9NQS1 362 aaPredicted RBP13.74□□□□□ -0.21
LIMS2-203ENST00000409254 ASNSD1Q9NWL6 643 aa13.74□□□□□ -0.21
LIMS2-203ENST00000409254 LCMT1Q9UIC8 334 aa13.74□□□□□ -0.21
LIMS2-203ENST00000409254 USP3Q9Y6I4 520 aa13.74□□□□□ -0.21
LIMS2-203ENST00000409254 CLUHO75153 1309 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 A0A087X0T9 212 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 SOBPA7XYQ1 873 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 LRG1P02750 347 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 FAM228BP0C875 321 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 SKILP12757 684 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 PFKLP17858 780 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 ATF6P18850 670 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 GRIK1P39086 918 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 NRIP1P48552 1158 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 PSEN1P49768 467 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 MAP3K7CLP57077 242 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 KRT83P78385 493 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 SPA17Q15506 151 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 CCDC142Q17RM4 750 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 CTC1Q2NKJ3 1217 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 TAF3Q5VWG9 929 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 PM20D1Q6GTS8 502 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 DENND1BQ6P3S1 775 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 TOGARAM2Q6ZUX3 1019 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 MON1BQ7L1V2 547 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 ADGRD2Q7Z7M1 963 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 PIGZQ86VD9 579 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 NUP93Q8N1F7 819 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 ARHGAP18Q8N392 663 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 ZNF276Q8N554 614 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 SLC7A14Q8TBB6 771 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 PPP1R13BQ96KQ4 1090 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 CHP1Q99653 195 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 SEPT5Q99719 369 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-203ENST00000409254 CRISPLD1Q9H336 500 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 MAN1C1Q9NR34 630 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 TMEM30AQ9NV96 361 aa13.73□□□□□ -0.21
LIMS2-203ENST00000409254 ANKRD62A6NC57 917 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 SEC24AO95486 1093 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 PLEKP08567 350 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-203ENST00000409254 TUBP50607 506 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 SLC5A3P53794 718 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 EPHA5P54756 1037 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 CCZ1BP86790 482 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 CCZ1P86791 482 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-203ENST00000409254 GOLGA8FQ08AF8 430 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 GOLGA8DPQ0D2H9 430 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 HYAL1Q12794 435 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 ZNF268Q14587 947 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-203ENST00000409254 PTPN20Q4JDL3 420 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 TCEAL5Q5H9L2 206 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 PPM1LQ5SGD2 360 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 NAA35Q5VZE5 725 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 PMF1Q6P1K2 205 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 ZNF662Q6ZS27 426 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 ERICH1Q86X53 443 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 PALB2Q86YC2 1186 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 SIX6OS1Q8N1H7 587 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 WDTC1Q8N5D0 677 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 C3orf20Q8ND61 904 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 C18orf8Q96DM3 657 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 LRCH3Q96II8 777 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 LRRC4Q9HBW1 653 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 SEPT11Q9NVA2 429 aaKnown RBP13.72□□□□□ -0.21
LIMS2-203ENST00000409254 SCML2Q9UQR0 700 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 PCDHGC5Q9Y5F6 944 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 EPN1Q9Y6I3 576 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-203ENST00000409254 SCINQ9Y6U3 715 aa13.72□□□□□ -0.21
LIMS2-203ENST00000409254 KIF26AQ9ULI4 1882 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-203ENST00000409254 BTNL10A8MVZ5 291 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 BEST1O76090 585 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 CACNA2D1P54289 1103 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 ITIH3Q06033 890 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 TWF1Q12792 350 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 PTP4A2Q12974 167 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 TCEAL1Q15170 157 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 PABPC1LQ4VXU2 614 aaKnown RBP13.71□□□□□ -0.21
LIMS2-203ENST00000409254 SNX30Q5VWJ9 437 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 SLC26A9Q7LBE3 791 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 PASD1Q8IV76 773 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 SCN4BQ8IWT1 228 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 MCOLN2Q8IZK6 566 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 TTC9BQ8N6N2 239 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 UBE2Q2Q8WVN8 375 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 PABPC5Q96DU9 382 aaKnown RBP13.71□□□□□ -0.21
LIMS2-203ENST00000409254 SLITRK1Q96PX8 696 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 CPXM1Q96SM3 734 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 CDK5RAP1Q96SZ6 601 aaKnown RBP13.71□□□□□ -0.21
LIMS2-203ENST00000409254 PCDHB18PQ96TA0 734 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 LPIN3Q9BQK8 851 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.71□□□□□ -0.21
LIMS2-203ENST00000409254 PRKD2Q9BZL6 878 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 SYNCQ9H7C4 482 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 MRPL47Q9HD33 250 aaKnown RBP13.71□□□□□ -0.21
LIMS2-203ENST00000409254 ADAM22Q9P0K1 906 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 CYTH4Q9UIA0 394 aa13.71□□□□□ -0.21
LIMS2-203ENST00000409254 A0A0A6YYK5 440 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms