RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 EPB42P16452 691 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 RPL9P32969 192 aaKnown RBP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 THOP1P52888 689 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 LBX1P52954 281 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 PDK2Q15119 407 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 HECTD3Q5T447 861 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 KLHDC7AQ5VTJ3 777 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 RASGRP2Q7LDG7 609 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 ZNF720Q7Z2F6 126 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 FAM172AQ8WUF8 416 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 PPWD1Q96BP3 646 aaKnown RBP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 SENP8Q96LD8 212 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 SERPINI1Q99574 410 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 CBWD1Q9BRT8 395 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 TRMT6Q9UJA5 497 aaKnown RBP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 ZNF510Q9Y2H8 683 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 TTC26A0AVF1 554 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 CCL16O15467 120 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 APODP05090 189 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 SYN1P17600 705 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 BDNFP23560 247 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 ATP5C1P36542 298 aaKnown RBP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 NDST1P52848 882 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 HPCAP84074 193 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 PTPN11Q06124 597 aaPredicted RBP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 TGM3Q08188 693 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 USP10Q14694 798 aaKnown RBP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 TRADDQ15628 312 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 HIF1AQ16665 826 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 FBXL19Q6PCT2 694 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 EDEM1Q92611 657 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 ANKS1AQ92625 1134 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 TSPAN18Q96SJ8 248 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 POP1Q99575 1024 aaKnown RBP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 C11orf84Q9BUA3 381 aaPredicted RBP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 ZCCHC2Q9C0B9 1178 aaKnown RBP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 PORCNQ9H237 461 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 BTBD7Q9P203 1132 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 FMN2Q9NZ56 1722 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 PLA2G6O60733 806 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 PMPCBO75439 489 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 APRTP07741 180 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 ACRP10323 421 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 SLC9A1P19634 815 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 PTPN3P26045 913 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 PTGER2P43116 358 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 CCDC85BQ15834 202 aaPredicted RBP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 KCTD16Q68DU8 428 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 RASAL3Q86YV0 1011 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 ZDHHC17Q8IUH5 632 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 CNPY4Q8N129 248 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 LPCAT1Q8NF37 534 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 SMG7Q92540 1137 aaKnown RBP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 ZDHHC6Q9H6R6 413 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 RAB6BQ9NRW1 208 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 CISHQ9NSE2 258 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 FZD9O00144 591 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 SLITRK3O94933 977 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 LSM8O95777 96 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 EIF4BP23588 611 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 OR1E1P30953 314 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 HALP42357 657 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PMS2P54278 862 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 ADIGQ0VDE8 80 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 ZKSCAN8Q15776 578 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 NOL9Q5SY16 702 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 DOK6Q6PKX4 331 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 WDR75Q8IWA0 830 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 VGLL2Q8N8G2 317 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 MAML3Q96JK9 1138 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 CAPN10Q9HC96 672 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 RNF186Q9NXI6 227 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 WWOXQ9NZC7 414 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 STX18Q9P2W9 335 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 APOBEC2Q9Y235 224 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 UBIAD1Q9Y5Z9 338 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 TLL2Q9Y6L7 1015 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 MRC1P22897 1456 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 IFT172Q9UG01 1749 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 ANO9A1A5B4 782 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PSMD12O00232 456 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 POLBP06746 335 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 FDPSP14324 419 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 HDCP19113 662 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 GALCP54803 685 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PTK7Q13308 1070 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PEX6Q13608 980 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 KRT72Q14CN4 511 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 GJB7Q6PEY0 223 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 RRM2BQ7LG56 351 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 ANKMY2Q8IV38 441 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 CCDC60Q8IWA6 550 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 SPATA18Q8TC71 538 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 HES6Q96HZ4 224 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PURBQ96QR8 312 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 TCF25Q9BQ70 676 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 TTPALQ9BTX7 342 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 OXCT2Q9BYC2 517 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 ASPSCR1Q9BZE9 553 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms