RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PRR5-ARHGAP8B1AHC4 643 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 KCNK1O00180 336 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 DHX15O43143 795 aaKnown RBP8.68□□□□□ -1.02
SNX13-201ENST00000409076 EDF1O60869 148 aaKnown RBP8.68□□□□□ -1.02
SNX13-201ENST00000409076 MLH1P40692 756 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 CACNA2D1P54289 1103 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 ARHGAP8P85298 464 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 DEUP1Q05D60 604 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 CCDC142Q17RM4 750 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 PPM1JQ5JR12 505 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 OLFML2BQ68BL8 750 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 RSBN1LQ6PCB5 846 aaPredicted RBP8.68□□□□□ -1.02
SNX13-201ENST00000409076 MOB2Q70IA6 237 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 DEFB132Q7Z7B7 95 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 CLNKQ7Z7G1 428 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 RASSF3Q86WH2 238 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 MAP4K3Q8IVH8 894 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 TEX9Q8N6V9 391 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 PAF1Q8N7H5 531 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 ANKLE1Q8NAG6 615 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 FAM151AQ8WW52 585 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 MTBPQ96DY7 904 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 NSL1Q96IY1 281 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 FGD4Q96M96 766 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 CPXM1Q96SM3 734 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 VCXQ9H320 206 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 RHBDL2Q9NX52 303 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 CYP39A1Q9NYL5 469 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 APPL1Q9UKG1 709 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 MFHAS1Q9Y4C4 1052 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 SPECC1L-ADORA2AF8WAN1 911 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 EXTL3O43909 919 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 SEC24DO94855 1032 aaPredicted RBP8.68□□□□□ -1.02
SNX13-201ENST00000409076 ENO3P13929 434 aaPredicted RBP8.68□□□□□ -1.02
SNX13-201ENST00000409076 IVDP26440 423 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 POLR2BP30876 1174 aaKnown RBP8.68□□□□□ -1.02
SNX13-201ENST00000409076 GPC3P51654 580 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 PKNOX1P55347 436 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 SP2Q02086 613 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 CACNB2Q08289 660 aaPredicted RBP8.68□□□□□ -1.02
SNX13-201ENST00000409076 BST1Q10588 318 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 USP4Q13107 963 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 HABP4Q5JVS0 413 aaKnown RBP8.68□□□□□ -1.02
SNX13-201ENST00000409076 WLSQ5T9L3 541 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 CMC1Q7Z7K0 106 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 MPP5Q8N3R9 675 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 CEP70Q8NHQ1 597 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 GSDMBQ8TAX9 411 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 RAB3IL1Q8TBN0 382 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 CPT1BQ92523 772 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 CD101Q93033 1021 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 RNF34Q969K3 372 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 L3MBTL3Q96JM7 780 aaPredicted RBP8.68□□□□□ -1.02
SNX13-201ENST00000409076 MIPEPQ99797 713 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 DDX18Q9NVP1 670 aaKnown RBP8.68□□□□□ -1.02
SNX13-201ENST00000409076 STOML1Q9UBI4 398 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 DNAJC16Q9Y2G8 782 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 IQANK1A0A1B0GTG1 560 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 CCDC189A1A4V9 331 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 TPST1O60507 370 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 DGAT1O75907 488 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 GSTA1P08263 222 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 C6orf222P0C671 652 aaPredicted RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 SKIP12755 728 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 DPEP1P16444 411 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 STAT5BP51692 787 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 JAK3P52333 1124 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 ANO7Q6IWH7 933 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 CRLF3Q8IUI8 442 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 FBXO16Q8IX29 292 aaPredicted RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 RCOR2Q8IZ40 523 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 RYBPQ8N488 228 aaPredicted RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 ZCCHC9Q8N567 271 aaKnown RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 ZSCAN18Q8TBC5 510 aaPredicted RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 NSUN6Q8TEA1 469 aaKnown RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 RXFP2Q8WXD0 754 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 DDX1Q92499 740 aaKnown RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 FAXDC2Q96IV6 333 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 ANKRD36BP1Q96IX9 119 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 DNAJC1Q96KC8 554 aaKnown RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 TWNKQ96RR1 684 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 HAPLN2Q9GZV7 340 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 RANBP17Q9H2T7 1088 aaKnown RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 SLC5A4Q9NY91 659 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 ANKRD36CQ5JPF3 1778 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 ASMTLO95671 621 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 MAPTP10636 758 aaKnown RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 TCF7P36402 384 aaPredicted RBP8.67□□□□□ -1.02
SNX13-201ENST00000409076 CXCL9Q07325 125 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 SPATA31A6Q5VVP1 1343 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 SLC30A9Q6PML9 568 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 SPATA24Q86W54 205 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 ZBTB8OSQ8IWT0 167 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 MICALL2Q8IY33 904 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 ADAMTSL1Q8N6G6 1762 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 FAM156AQ8NDB6 213 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 MCPH1Q8NEM0 835 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 CCHCR1Q8TD31 782 aa8.67□□□□□ -1.02
SNX13-201ENST00000409076 E2F7Q96AV8 911 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms