RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 RUSC2Q8N2Y8 1516 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 PRAMEF33A0A0G2JMD5 474 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 MYADML2A6NDP7 307 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 PCDH17O14917 1159 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 PRAMEF10O60809 474 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 SUN1O94901 812 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 ZSCAN22P10073 491 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 FGFR4P22455 802 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 EPHA3P29320 983 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 CD6P30203 668 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 KRT9P35527 623 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 ZEB1P37275 1124 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 TOB1P50616 345 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 PDE6CP51160 858 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 ZNF134P52741 427 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 RABGGTBP53611 331 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 ACTR2P61160 394 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 SCAPQ12770 1279 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 BOP1Q14137 746 aaKnown RBP5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 SPDYE7PQ495Y7 208 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 HS1BP3Q53T59 392 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 HYIQ5T013 277 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 ICE2Q659A1 982 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 FAAH2Q6GMR7 532 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 RETSATQ6NUM9 610 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 TCTN3Q6NUS6 607 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 NFRKBQ6P4R8 1299 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 TTLL10Q6ZVT0 673 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 MICALCLQ6ZW33 695 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 ZNF280BQ86YH2 543 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 DNAJB14Q8TBM8 379 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 SNX19Q92543 992 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 GNRHR2Q96P88 292 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 OSBPL9Q96SU4 736 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 MAP3K20Q9NYL2 800 aaKnown RBP5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 CTTNBP2NLQ9P2B4 639 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 NDRG4Q9ULP0 352 aaKnown RBP5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 C19orf53Q9UNZ5 99 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 SCAF8Q9UPN6 1271 aaKnown RBP5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 SCINQ9Y6U3 715 aa5.44□□□□□ -1.54
HMGB3P18-201ENST00000406327 HMGXB3Q12766 1538 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 F5H697 171 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 ZSCAN9O15535 394 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 PLATP00750 562 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 TK1P04183 234 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 ANXA6P08133 673 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 COMTP21964 271 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 RBL1P28749 1068 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 APOBEC3AP31941 199 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 ELF1P32519 619 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 NPTX2P47972 431 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 PGDP52209 483 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 HSD11B2P80365 405 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 FPGSQ05932 587 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 TRPC3Q13507 836 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 TUBB3Q13509 450 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 DYRK1AQ13627 763 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 CSHL1Q14406 222 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 CLCA4Q14CN2 919 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 FAM110CQ1W6H9 321 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 ARHGAP40Q5TG30 622 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 ABLIM2Q6H8Q1 611 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 RGS7BPQ6MZT1 257 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 RINT1Q6NUQ1 792 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 GLB1LQ6UWU2 654 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 GDF7Q7Z4P5 450 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 KCTD20Q7Z5Y7 419 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 MAPKAPK5Q8IW41 473 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 SUGP1Q8IWZ8 645 aaKnown RBP5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 NSUN7Q8NE18 718 aaKnown RBP5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 AFG1LQ8WV93 481 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 CPT1BQ92523 772 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 TRAPPC9Q96Q05 1148 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 HIST1H2AAQ96QV6 131 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 TTPALQ9BTX7 342 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 SLC26A6Q9BXS9 759 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 INO80BQ9C086 356 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 TAF1DQ9H5J8 278 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 CXorf36Q9H7Y0 433 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 UNKLQ9H9P5 680 aaKnown RBP5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 MLXIPQ9HAP2 919 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 TMLHEQ9NVH6 421 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 NDUFAF4Q9P032 175 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 HSFX1Q9UBD0 423 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 FBXO2Q9UK22 296 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 FPGT-TNNI3KV9GXZ4 949 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 ITIH6Q6UXX5 1313 aa5.43□□□□□ -1.54
HMGB3P18-201ENST00000406327 PNMA6EA0A0J9YXQ4 647 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 GAGE12BA1L429 117 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 GAGE12HA6NDE8 117 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 LEFTY2O00292 366 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 HOXC11O43248 304 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 DNPH1O43598 174 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 CD19P15391 556 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 AKT1P31749 480 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 CNR2P34972 360 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 CDK7P50613 346 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 RNASE9P60153 205 aaKnown RBP5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 OCA2Q04671 838 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms