RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 IDH3BO43837 385 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 WBP4O75554 376 aaKnown RBP6.09□□□□□ -1.44
HDAC9-203ENST00000406072 SEMA3DO95025 777 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 CHEK2O96017 543 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 GH1P01241 217 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 PROCP04070 461 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 NUDT17P0C025 328 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 TMEM253P0C7T8 217 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 ALDH1A3P47895 512 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 MXI1P50539 228 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 SP4Q02446 784 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 SPIDRQ14159 915 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 NRF1Q16656 503 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 MAPK6Q16659 721 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 PFKFB3Q16875 520 aaPredicted RBP6.09□□□□□ -1.44
HDAC9-203ENST00000406072 SPRED3Q2MJR0 410 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 TBC1D10BQ4KMP7 808 aaPredicted RBP6.09□□□□□ -1.44
HDAC9-203ENST00000406072 SYCP2LQ5T4T6 812 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 SRBD1Q8N5C6 995 aaKnown RBP6.09□□□□□ -1.44
HDAC9-203ENST00000406072 RNF148Q8N7C7 305 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 CCNYL1Q8N7R7 359 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 NLGN2Q8NFZ4 835 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 ATP8B4Q8TF62 1192 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 INPP4AQ96PE3 977 aaPredicted RBP6.09□□□□□ -1.44
HDAC9-203ENST00000406072 WRNIP1Q96S55 665 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 SYT17Q9BSW7 474 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 WDR18Q9BV38 432 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 MRPS26Q9BYN8 205 aaKnown RBP6.09□□□□□ -1.44
HDAC9-203ENST00000406072 GLT8D2Q9H1C3 349 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 ZNF277Q9NRM2 450 aaPredicted RBP6.09□□□□□ -1.44
HDAC9-203ENST00000406072 GIN1Q9NXP7 522 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 WASF2Q9Y6W5 498 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 FRMPD4Q14CM0 1322 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 MYPNQ86TC9 1320 aa6.09□□□□□ -1.44
HDAC9-203ENST00000406072 A0A087WXM4 84 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 MAFGO15525 162 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 TBX10O75333 385 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 PENKP01210 267 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 EIF2S1P05198 315 aaKnown RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 PAEPP09466 180 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 POLR2MP0CAP2 368 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 FDX1P10109 184 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 ADRA1DP25100 572 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 GEMIN4P57678 1058 aaKnown RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 CDK16Q00536 496 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 BFSP2Q13515 415 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 PKN1Q16512 942 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 PKN2Q16513 984 aaKnown RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 CARTPTQ16568 116 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 USH1GQ495M9 461 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 TJAP1Q5JTD0 557 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 GPATCH4Q5T3I0 446 aaKnown RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 ZNF662Q6ZS27 426 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 ANKRD23Q86SG2 305 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 PSTPIP2Q9H939 334 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 COPS7BQ9H9Q2 264 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 HMG20AQ9NP66 347 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 MAP3K20Q9NYL2 800 aaKnown RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 MAGED2Q9UNF1 606 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 INPP5FQ9Y2H2 1132 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 TTLL3Q9Y4R7 772 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 ZNF541Q9H0D2 1346 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 CAPN8A6NHC0 703 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 DDX39AO00148 427 aaKnown RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 ZBTB39O15060 712 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 TSC22D2O75157 780 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 ZBTB11O95625 1053 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 NELFEP18615 380 aaKnown RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 HOXA7P31268 230 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 PBX1P40424 430 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 ABL2P42684 1182 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 SCNN1DP51172 638 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 MRPL28Q13084 256 aaKnown RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 SH3D19Q5HYK7 790 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 SPDYCQ5MJ68 293 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 TTC27Q6P3X3 843 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 ATG14Q6ZNE5 492 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 NET1Q7Z628 596 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 IFNEQ86WN2 208 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 NDUFAF2Q8N183 169 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 TCP10LQ8TDR4 215 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 CNDP1Q96KN2 507 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 AGPAT1Q99943 283 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 MXD3Q9BW11 206 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 FOXP3Q9BZS1 431 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 PPCSQ9HAB8 311 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 KCNQ5Q9NR82 932 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 FBXO6Q9NRD1 293 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 ARL8BQ9NVJ2 186 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 PRKAG3Q9UGI9 489 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 PHF24Q9UPV7 400 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 ATF5Q9Y2D1 282 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-203ENST00000406072 SPEF1Q9Y4P9 236 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 FADS3Q9Y5Q0 445 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 WNT10BO00744 389 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 GSNP06396 782 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 CD58P19256 250 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 ANXA13P27216 316 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 TYK2P29597 1187 aa6.08□□□□□ -1.44
HDAC9-203ENST00000406072 SOX11P35716 441 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms