RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 VCAM1P19320 739 aa13.82□□□□□ -0.2
SNED1-205ENST00000405547 CLEC16AQ2KHT3 1053 aa13.82□□□□□ -0.2
SNED1-205ENST00000405547 FOPNLQ96NB1 174 aa13.82□□□□□ -0.2
SNED1-205ENST00000405547 ST3GAL1Q11201 340 aa13.82□□□□□ -0.2
SNED1-205ENST00000405547 VEPH1Q14D04 833 aa13.82□□□□□ -0.2
SNED1-205ENST00000405547 MTFR1Q15390 333 aa13.82□□□□□ -0.2
SNED1-205ENST00000405547 THEMIS2Q5TEJ8 643 aa13.82□□□□□ -0.2
SNED1-205ENST00000405547 CBWD2Q8IUF1 395 aa13.82□□□□□ -0.2
SNED1-205ENST00000405547 HOMEZQ8IX15 550 aa13.82□□□□□ -0.2
SNED1-205ENST00000405547 SAMD3Q8N6K7 520 aa13.82□□□□□ -0.2
SNED1-205ENST00000405547 INPP5DQ92835 1189 aa13.82□□□□□ -0.2
SNED1-205ENST00000405547 ZFRQ96KR1 1074 aaKnown RBP13.82□□□□□ -0.2
SNED1-205ENST00000405547 SLC30A1Q9Y6M5 507 aa13.82□□□□□ -0.2
SNED1-205ENST00000405547 E2F8A0AVK6 867 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 EFCAB12Q6NXP0 572 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 NCKIPSDQ9NZQ3 722 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 SPATA31D1Q6ZQQ2 1576 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 CCDC78A2IDD5 438 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 ZNF839A8K0R7 811 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 SOAT2O75908 522 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 PDE5AO76074 875 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 NCAM1P13591 858 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 LAYNQ6UX15 382 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 NR1H4Q96RI1 486 aaPredicted RBP13.81□□□□□ -0.2
SNED1-205ENST00000405547 THAP1Q9NVV9 213 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 ATP9AO75110 1047 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 RPL21P46778 160 aaKnown RBP13.81□□□□□ -0.2
SNED1-205ENST00000405547 ERVK-9P63128 1117 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 PRR5LQ6MZQ0 368 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 RAB42Q8N4Z0 105 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 RPS6P62753 249 aaKnown RBP13.81□□□□□ -0.2
SNED1-205ENST00000405547 KIZQ2M2Z5 673 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 NOTUMQ6P988 496 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 ITGB3P05106 788 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 OR6J1Q8NGC5 347 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 SHCBP1LQ9BZQ2 653 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 TCRBV5S4A2TA0A5A2 114 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 KCNQ2O43526 872 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 RALBP11234 206 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 POU4F1Q01851 419 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 ACCSLQ4AC99 568 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 LRRC8DQ7L1W4 858 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 DUSP9Q99956 384 aaKnown RBP13.81□□□□□ -0.2
SNED1-205ENST00000405547 NFIBO00712 420 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 RARBP10826 455 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 KYQ8NBH2 561 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 GMCL1Q96IK5 515 aa13.81□□□□□ -0.2
SNED1-205ENST00000405547 CRELD2Q6UXH1 353 aaPredicted RBP13.8□□□□□ -0.2
SNED1-205ENST00000405547 ZNF333Q96JL9 665 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 SNUPNO95149 360 aaKnown RBP13.8□□□□□ -0.2
SNED1-205ENST00000405547 CACNA2D1P54289 1103 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 ACTL9Q8TC94 416 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 SLC20A1Q8WUM9 679 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 ACSF2Q96CM8 615 aaPredicted RBP13.8□□□□□ -0.2
SNED1-205ENST00000405547 RHBDL2Q9NX52 303 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 FAM205AQ6ZU69 1335 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 CPB1P15086 417 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 RXRBP28702 533 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 NPTX2P47972 431 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 CYP24A1Q07973 514 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 ITGB3BPQ13352 177 aaPredicted RBP13.8□□□□□ -0.2
SNED1-205ENST00000405547 CCDC153Q494R4 210 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 MTMR12Q9C0I1 747 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 IMPAD1Q9NX62 359 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 ZNRF3Q9ULT6 936 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 MYO9BQ13459 2157 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 PTRHD1Q6GMV3 140 aaKnown RBP13.8□□□□□ -0.2
SNED1-205ENST00000405547 CCDC60Q8IWA6 550 aaPredicted RBP13.8□□□□□ -0.2
SNED1-205ENST00000405547 RFWD2Q8NHY2 731 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 KATNAL1Q9BW62 490 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 WDCPQ9H6R7 721 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 DNAJC16Q9Y2G8 782 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 ZC3H4Q9UPT8 1303 aaKnown RBP13.8□□□□□ -0.2
SNED1-205ENST00000405547 TOMM70O94826 608 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 TAF2Q6P1X5 1199 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 SPOCD1Q6ZMY3 1216 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 USP33Q8TEY7 942 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 PRPF4O43172 522 aaKnown RBP eCLIP13.8□□□□□ -0.2
SNED1-205ENST00000405547 TNFAIP8O95379 198 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 PYGMP11217 842 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 CHRNB3Q05901 458 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 MREGQ8N565 214 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 RUVBL2Q9Y230 463 aaKnown RBP13.8□□□□□ -0.2
SNED1-205ENST00000405547 TECPR2O15040 1411 aa13.8□□□□□ -0.2
SNED1-205ENST00000405547 VDRP11473 427 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 CCDC15Q0P6D6 951 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 SNX30Q5VWJ9 437 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 FAM9CQ8IZT9 166 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 SH3KBP1Q96B97 665 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 SH3GL1Q99961 368 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 ATXN2Q99700 1313 aaKnown RBP13.79□□□□□ -0.2
SNED1-205ENST00000405547 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.79□□□□□ -0.2
SNED1-205ENST00000405547 A0A1B0GW55 424 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 DUX4L2P0CJ85 424 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 DUX4L3P0CJ86 424 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 DUX4L4P0CJ87 422 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 DUX4L5P0CJ88 424 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 DUX4L6P0CJ89 424 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 DUX4L7P0CJ90 424 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 EPHB2P29323 1055 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms