RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 GREB1Q4ZG55 1949 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 OTOL1A6NHN0 477 aaPredicted RBP14.12□□□□□ -0.15
SDF4-203ENST00000403997 STX10O60499 249 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 CCDC130P13994 396 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 CXCL12P48061 93 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 CCR3P51677 355 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 FKBP3Q00688 224 aaKnown RBP14.12□□□□□ -0.15
SDF4-203ENST00000403997 GRSF1Q12849 480 aaKnown RBP eCLIP14.12□□□□□ -0.15
SDF4-203ENST00000403997 USP4Q13107 963 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 GAS6Q14393 721 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 COBLL1Q53SF7 1204 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 WDR44Q5JSH3 913 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 KRT39Q6A163 491 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 FUKQ8N0W3 1084 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 SPEM1Q8N4L4 309 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 CPA6Q8N4T0 437 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 C12orf29Q8N999 325 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 SCAMP5Q8TAC9 235 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 SLC2A14Q8TDB8 520 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 OSCP1Q8WVF1 389 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 FBXO32Q969P5 355 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 NIF3L1Q9GZT8 377 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 RNF38Q9H0F5 515 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 KRT82Q9NSB4 513 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 FAM49BQ9NUQ9 324 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 CHORDC1Q9UHD1 332 aaPredicted RBP14.12□□□□□ -0.15
SDF4-203ENST00000403997 PCDHGA2Q9Y5H1 932 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 WNT6Q9Y6F9 365 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 LEFTY2O00292 366 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 OBSL1O75147 1896 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 TCF3P15923 654 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 CD58P19256 250 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 MXI1P50539 228 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 SLC5A3P53794 718 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 PMS1P54277 932 aaKnown RBP14.11□□□□□ -0.15
SDF4-203ENST00000403997 NRLP54845 237 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 MAP3K7CLP57077 242 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 SATB1Q01826 763 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 NR1H3Q13133 447 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 STIM1Q13586 685 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 DCAF17Q5H9S7 520 aaPredicted RBP14.11□□□□□ -0.15
SDF4-203ENST00000403997 TCERG1LQ5VWI1 586 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 Q6ZS52 159 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 ELOA2Q8IYF1 753 aaPredicted RBP14.11□□□□□ -0.15
SDF4-203ENST00000403997 PDZD8Q8NEN9 1154 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 SEMA4DQ92854 862 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 ATP2A3Q93084 1043 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 SMOQ99835 787 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 NT5C1AQ9BXI3 368 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 FAM126AQ9BYI3 521 aaPredicted RBP14.11□□□□□ -0.15
SDF4-203ENST00000403997 DNAI2Q9GZS0 605 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 LINC00597Q9H2U6 94 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 ECT2Q9H8V3 914 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 SMPD4Q9NXE4 827 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 ANAPC1Q9H1A4 1944 aa14.11□□□□□ -0.15
SDF4-203ENST00000403997 MYO15AQ9UKN7 3530 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 TRIM49BA6NDI0 452 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 TRDMT1O14717 391 aaKnown RBP14.1□□□□□ -0.15
SDF4-203ENST00000403997 TNFRSF10BO14763 440 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 PSMA7O14818 248 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 GADD45BO75293 160 aaPredicted RBP14.1□□□□□ -0.15
SDF4-203ENST00000403997 BEST1O76090 585 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 OAS1P00973 400 aaKnown RBP14.1□□□□□ -0.15
SDF4-203ENST00000403997 MBL2P11226 248 aaPredicted RBP14.1□□□□□ -0.15
SDF4-203ENST00000403997 ADORA2BP29275 332 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 GALK1P51570 392 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 MCCD1P59942 119 aaPredicted RBP14.1□□□□□ -0.15
SDF4-203ENST00000403997 SLC7A9P82251 487 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 ZXDBP98169 803 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 LRRC63Q05C16 580 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 INCA1Q0VD86 236 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 CCINQ13939 588 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 TMEM196Q5HYL7 178 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 SYNPOQ8N3V7 929 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 ZBTB44Q8NCP5 570 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 FBXL13Q8NEE6 735 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 ZMIZ2Q8NF64 920 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 OVCA2Q8WZ82 227 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 EXOC4Q96A65 974 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 CYFIP2Q96F07 1278 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 TWNKQ96RR1 684 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 HNRNPABQ99729 332 aaKnown RBP14.1□□□□□ -0.15
SDF4-203ENST00000403997 HINFPQ9BQA5 517 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 COMMD8Q9NX08 183 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 RAB20Q9NX57 234 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 IL37Q9NZH6 218 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 MAN1B1Q9UKM7 699 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 CIZ1Q9ULV3 898 aaPredicted RBP14.1□□□□□ -0.15
SDF4-203ENST00000403997 CPQQ9Y646 472 aa14.1□□□□□ -0.15
SDF4-203ENST00000403997 PATJQ8NI35 1801 aa14.09□□□□□ -0.15
SDF4-203ENST00000403997 SLC16A3O15427 465 aaKnown RBP14.09□□□□□ -0.15
SDF4-203ENST00000403997 CILPO75339 1184 aa14.09□□□□□ -0.15
SDF4-203ENST00000403997 FAM200BP0CF97 657 aa14.09□□□□□ -0.15
SDF4-203ENST00000403997 GJA4P35212 333 aa14.09□□□□□ -0.15
SDF4-203ENST00000403997 EML3Q32P44 896 aa14.09□□□□□ -0.15
SDF4-203ENST00000403997 ZNF394Q53GI3 561 aa14.09□□□□□ -0.15
SDF4-203ENST00000403997 HECTD3Q5T447 861 aa14.09□□□□□ -0.15
SDF4-203ENST00000403997 KLHL10Q6JEL2 608 aa14.09□□□□□ -0.15
SDF4-203ENST00000403997 FSTL4Q6MZW2 842 aa14.09□□□□□ -0.15
SDF4-203ENST00000403997 ZC3H3Q8IXZ2 948 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms