RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 DLGAP2Q9P1A6 1054 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 ZFATQ9P243 1243 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 PPARGC1AQ9UBK2 798 aaKnown RBP12.51□□□□□ -0.41
RBM39-206ENST00000403542 ADGRA2Q96PE1 1338 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 M0QYV0 167 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 GSC2O15499 205 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 KCNN4O15554 427 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 DKC1O60832 514 aaKnown RBP eCLIP12.51□□□□□ -0.41
RBM39-206ENST00000403542 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
RBM39-206ENST00000403542 AMPD1P23109 780 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 ARL2P36404 184 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 GMPRP36959 345 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 ASPAP45381 313 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 IGBP1P78318 339 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 ZNF200P98182 395 aaPredicted RBP12.51□□□□□ -0.41
RBM39-206ENST00000403542 HADHQ16836 314 aaKnown RBP12.51□□□□□ -0.41
RBM39-206ENST00000403542 PPP6R3Q5H9R7 873 aaPredicted RBP12.51□□□□□ -0.41
RBM39-206ENST00000403542 MROH9Q5TGP6 573 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 EEF1DP3Q658K8 133 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 MZB1Q8WU39 189 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 FAM161BQ96MY7 647 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 BTBD10Q9BSF8 475 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 FOXP3Q9BZS1 431 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.51□□□□□ -0.412e-13■□□□□ 9.7
RBM39-206ENST00000403542 DDX56Q9NY93 547 aaKnown RBP12.51□□□□□ -0.41
RBM39-206ENST00000403542 TAS2R1Q9NYW7 299 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 HACL1Q9UJ83 578 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 USP18Q9UMW8 372 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 MEI4A8MW99 385 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 SPATA31C2B4DYI2 1134 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 FCHO1O14526 889 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 ADCY3O60266 1144 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 RFC5P40937 340 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 ALDH18A1P54886 795 aaKnown RBP12.5□□□□□ -0.41
RBM39-206ENST00000403542 TMPRSS15P98073 1019 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 KLHL38Q2WGJ6 581 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 BSPRYQ5W0U4 402 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 DRICH1Q6PGQ1 229 aaPredicted RBP12.5□□□□□ -0.41
RBM39-206ENST00000403542 CEP128Q6ZU80 1094 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 TEX2Q8IWB9 1127 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 BRSK2Q8IWQ3 736 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 UNC5BQ8IZJ1 945 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 FLAD1Q8NFF5 587 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 RDM1Q8NG50 284 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 PCYT2Q99447 389 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 PICK1Q9NRD5 415 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 STYXL1Q9Y6J8 313 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 LOXHD1Q8IVV2 1947 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 B2RBV5 119 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 H0YCG3 227 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 COPEO14579 308 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 CCDC22O60826 627 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 TBX10O75333 385 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 RNF8O76064 485 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 PRKCBP05771 671 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 UBA1P22314 1058 aaKnown RBP12.5□□□□□ -0.41
RBM39-206ENST00000403542 TCF7P36402 384 aaPredicted RBP12.5□□□□□ -0.41
RBM39-206ENST00000403542 SERPINB4P48594 390 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 STAT5BP51692 787 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 CRADDP78560 199 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 MXRA7P84157 204 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 EN1Q05925 392 aaPredicted RBP12.5□□□□□ -0.41
RBM39-206ENST00000403542 LRRC36Q1X8D7 754 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 ZC3H12AQ5D1E8 599 aaKnown RBP12.5□□□□□ -0.41
RBM39-206ENST00000403542 RNF220Q5VTB9 566 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 CES4AQ5XG92 561 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 C12orf29Q8N999 325 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 ZNF280CQ8ND82 737 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 CCDC110Q8TBZ0 833 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.5□□□□□ -0.41
RBM39-206ENST00000403542 SCG3Q8WXD2 468 aaKnown RBP12.5□□□□□ -0.41
RBM39-206ENST00000403542 NSL1Q96IY1 281 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 PGLYRP2Q96PD5 576 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 SRPK1Q96SB4 655 aaKnown RBP12.5□□□□□ -0.41
RBM39-206ENST00000403542 SDCBP2Q9H190 292 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 ACAD9Q9H845 621 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 NGRNQ9NPE2 291 aaKnown RBP12.5□□□□□ -0.41
RBM39-206ENST00000403542 PCMTD2Q9NV79 361 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 IL1RAPL1Q9NZN1 696 aa12.5□□□□□ -0.41
RBM39-206ENST00000403542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.49□□□□□ -0.41
RBM39-206ENST00000403542 NVLO15381 856 aaKnown RBP12.49□□□□□ -0.41
RBM39-206ENST00000403542 LGR5O75473 907 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 BAG2O95816 211 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 RTP1P59025 263 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 ROR1Q01973 937 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 RASA2Q15283 850 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 STXBP2Q15833 593 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 SGSM1Q2NKQ1 1148 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 CCDC62Q6P9F0 684 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 RGS9BPQ6ZS82 235 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 BBS12Q6ZW61 710 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 HEXIM2Q96MH2 286 aaKnown RBP12.49□□□□□ -0.41
RBM39-206ENST00000403542 RILPQ96NA2 401 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 MMP19Q99542 508 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 ADPGKQ9BRR6 497 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 CNTN6Q9UQ52 1028 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 COL2A1P02458 1487 aaPredicted RBP12.49□□□□□ -0.41
RBM39-206ENST00000403542 MSCO60682 206 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 TOM1L1O75674 476 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 ITGB3P05106 788 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms