RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 USP33Q8TEY7 942 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 MMS19Q96T76 1030 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 TPSD1Q9BZJ3 242 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 LINC00597Q9H2U6 94 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 INTS13Q9NVM9 706 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 MYO16Q9Y6X6 1858 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 ANAPC1Q9H1A4 1944 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 C4orf47A7E2U8 309 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 LEFTY2O00292 366 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 SLC9A3R1O14745 358 aaPredicted RBP13.16□□□□□ -0.3
PRAME-204ENST00000403441 KHNYNO15037 678 aaKnown RBP13.16□□□□□ -0.3
PRAME-204ENST00000403441 KLRC4O43908 158 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 ALDH1A2O94788 518 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 MYL1P05976 194 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 WARSP23381 471 aaKnown RBP13.16□□□□□ -0.3
PRAME-204ENST00000403441 OPRD1P41143 372 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 CUL4BQ13620 913 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 BMT2Q1RMZ1 405 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 TTC30AQ86WT1 665 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 KIAA1958Q8N8K9 716 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 OR5B17Q8NGF7 314 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 ZNF507Q8TCN5 953 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 KBTBD7Q8WVZ9 684 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 CNOT6LQ96LI5 555 aaKnown RBP13.16□□□□□ -0.3
PRAME-204ENST00000403441 SNX25Q9H3E2 840 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 GOLPH3LQ9H4A5 285 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 KIAA1586Q9HCI6 787 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 CRTAC1Q9NQ79 661 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 SERTAD1Q9UHV2 236 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
PRAME-204ENST00000403441 MMP17Q9ULZ9 603 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 INVSQ9Y283 1065 aa13.16□□□□□ -0.3
PRAME-204ENST00000403441 UBE4BO95155 1302 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 PTPRJQ12913 1337 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 ZNF840PA6NDX5 716 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 K7EQS6 105 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 PRPF6O94906 941 aaKnown RBP13.15□□□□□ -0.3
PRAME-204ENST00000403441 ADH1CP00326 375 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 ABL1P00519 1130 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 CYP17A1P05093 508 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 PDGFRBP09619 1106 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 LMO2P25791 158 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 CASP1P29466 404 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 NDUFA8P51970 172 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 NOP14P78316 857 aaKnown RBP13.15□□□□□ -0.3
PRAME-204ENST00000403441 ASIC1P78348 528 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 SLC7A9P82251 487 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 MRPS21P82921 87 aaKnown RBP13.15□□□□□ -0.3
PRAME-204ENST00000403441 MDH1BQ5I0G3 518 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 FAM26FQ5R3K3 315 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 SCARA3Q6AZY7 606 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 LIMS2Q7Z4I7 341 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 FILIP1Q7Z7B0 1213 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 RASSF3Q86WH2 238 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 DDX42Q86XP3 938 aaKnown RBP eCLIP13.15□□□□□ -0.3
PRAME-204ENST00000403441 CBWD2Q8IUF1 395 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 WDR49Q8IV35 697 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 CCDC33Q8N5R6 958 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 MDGA1Q8NFP4 955 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 MYCBPAPQ8TBZ2 947 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 HPS3Q969F9 1004 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 PAGE5Q96GU1 130 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 PCED1BQ96HM7 432 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 SPACA7Q96KW9 195 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 SLITRK1Q96PX8 696 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 TTLL2Q9BWV7 592 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 TMEM9BQ9NQ34 198 aa13.15□□□□□ -0.3
PRAME-204ENST00000403441 F8VP50 259 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 DHPSP49366 369 aaPredicted RBP13.14□□□□□ -0.31
PRAME-204ENST00000403441 USP46P62068 366 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 TNNC1P63316 161 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 ZNF252P-AS1Q0IIN9 211 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 CRY1Q16526 586 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 HSF5Q4G112 596 aaPredicted RBP13.14□□□□□ -0.31
PRAME-204ENST00000403441 SH3PXD2AQ5TCZ1 1133 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 TDRD10Q5VZ19 366 aaKnown RBP13.14□□□□□ -0.31
PRAME-204ENST00000403441 HS2ST1Q7LGA3 356 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 CEP57L1Q8IYX8 460 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 WHAMMQ8TF30 809 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 TMEM174Q8WUU8 243 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 SCFD1Q8WVM8 642 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 C8orf48Q96LL4 319 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 ELOVL4Q9GZR5 314 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 GDPD2Q9HCC8 539 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 SMPD4Q9NXE4 827 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 HSPBP1Q9NZL4 362 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 CFAP97Q9P2B7 532 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 CPQQ9Y646 472 aa13.14□□□□□ -0.31
PRAME-204ENST00000403441 FRYQ5TBA9 3013 aa13.13□□□□□ -0.31
PRAME-204ENST00000403441 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.13□□□□□ -0.31
PRAME-204ENST00000403441 MAP3K13O43283 966 aa13.13□□□□□ -0.31
PRAME-204ENST00000403441 TGFB1I1O43294 461 aa13.13□□□□□ -0.31
PRAME-204ENST00000403441 KLF8O95600 359 aaPredicted RBP13.13□□□□□ -0.31
PRAME-204ENST00000403441 OLFM2O95897 454 aa13.13□□□□□ -0.31
PRAME-204ENST00000403441 OAS1P00973 400 aaKnown RBP13.13□□□□□ -0.31
PRAME-204ENST00000403441 APODP05090 189 aa13.13□□□□□ -0.31
PRAME-204ENST00000403441 PROS1P07225 676 aa13.13□□□□□ -0.31
PRAME-204ENST00000403441 DLATP10515 647 aaKnown RBP13.13□□□□□ -0.31
PRAME-204ENST00000403441 TNNI1P19237 187 aa13.13□□□□□ -0.31
PRAME-204ENST00000403441 BCKDHBP21953 392 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms