RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 AKAP10O43572 662 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 SNTG2Q9NY99 539 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.85■□□□□ 0.61
COL18A1-204ENST00000400337 RALBP11234 206 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 NUMBP49757 651 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 ZNF177Q13360 481 aaPredicted RBP18.85■□□□□ 0.61
COL18A1-204ENST00000400337 FAM83EQ2M2I3 478 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 HS6ST3Q8IZP7 471 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 SLC4A9Q96Q91 983 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.85■□□□□ 0.61
COL18A1-204ENST00000400337 CFAP99D6REC4 459 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 SRP72O76094 671 aaKnown RBP18.85■□□□□ 0.61
COL18A1-204ENST00000400337 GLI1P08151 1106 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 SNX31Q8N9S9 440 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 KCTD10Q9H3F6 313 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 AK9Q5TCS8 1911 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 ARHGAP10A1A4S6 786 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 SDR42E2A6NKP2 422 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 CAND2O75155 1236 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 ZBTB17Q13105 803 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 SGO1Q5FBB7 561 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 FBXO47Q5MNV8 452 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 MCOLN2Q8IZK6 566 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 PTPN7P35236 360 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 AVPR1AP37288 418 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 CCNG2Q16589 344 aa18.85■□□□□ 0.61
COL18A1-204ENST00000400337 GRIK5Q16478 980 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 C11orf63Q6NUN7 778 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 TRAPPC12Q8WVT3 735 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 ZNF606Q8WXB4 792 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 SHCBP1LQ9BZQ2 653 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 FRMPD4Q14CM0 1322 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 LAYNQ6UX15 382 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 TEKT4Q8WW24 435 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 SPIRE2Q8WWL2 714 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 DACH2Q96NX9 599 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 APOL2Q9BQE5 337 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 CRLS1Q9UJA2 301 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 SPDYE5A6NIY4 337 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 CSE1LP55060 971 aaKnown RBP18.84■□□□□ 0.61
COL18A1-204ENST00000400337 CNTN2Q02246 1040 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 SPDYE7PQ495Y7 208 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 NSL1Q96IY1 281 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 P2RX7Q99572 595 aaKnown RBP18.84■□□□□ 0.61
COL18A1-204ENST00000400337 PHTF1Q9UMS5 762 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 ALDH5A1P51649 535 aaPredicted RBP18.84■□□□□ 0.61
COL18A1-204ENST00000400337 GRIK4Q16099 956 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.84■□□□□ 0.612e-6■■■■■ 44.1
COL18A1-204ENST00000400337 NIPA1Q7RTP0 329 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 ACTL9Q8TC94 416 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 IL1RL2Q9HB29 575 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 TMBIM4Q9HC24 238 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 TEKT2Q9UIF3 430 aa18.84■□□□□ 0.61
COL18A1-204ENST00000400337 F5H5T6 163 aa18.83■□□□□ 0.61
COL18A1-204ENST00000400337 IGF2BP3O00425 579 aaKnown RBP eCLIP18.83■□□□□ 0.61
COL18A1-204ENST00000400337 LRG1P02750 347 aa18.83■□□□□ 0.61
COL18A1-204ENST00000400337 PPP3CCP48454 512 aa18.83■□□□□ 0.61
COL18A1-204ENST00000400337 SLC12A3P55017 1021 aa18.83■□□□□ 0.61
COL18A1-204ENST00000400337 C1QBPQ07021 282 aaKnown RBP18.83■□□□□ 0.61
COL18A1-204ENST00000400337 C16orf87Q6PH81 154 aa18.83■□□□□ 0.61
COL18A1-204ENST00000400337 EME1Q96AY2 570 aa18.83■□□□□ 0.61
COL18A1-204ENST00000400337 AAR2Q9Y312 384 aaKnown RBP18.83■□□□□ 0.61
COL18A1-204ENST00000400337 CASTOR2A6NHX0 329 aa18.83■□□□□ 0.61
COL18A1-204ENST00000400337 PDHXO00330 501 aa18.83■□□□□ 0.61
COL18A1-204ENST00000400337 BST2Q10589 180 aaKnown RBP18.83■□□□□ 0.61
COL18A1-204ENST00000400337 TAGAPQ8N103 731 aa18.83■□□□□ 0.61
COL18A1-204ENST00000400337 DDX5P17844 614 aaKnown RBP18.83■□□□□ 0.6
COL18A1-204ENST00000400337 REPS2Q8NFH8 660 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 ITGA11Q9UKX5 1188 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 HOXA10P31260 410 aaPredicted RBP18.83■□□□□ 0.6
COL18A1-204ENST00000400337 LHX1P48742 406 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 KRT72Q14CN4 511 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 CTXN3Q4LDR2 81 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 OLFM3Q96PB7 478 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 ZCWPW1Q9H0M4 648 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 INTS13Q9NVM9 706 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 FZD1Q9UP38 647 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 ADCY3O60266 1144 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 MTFR1Q15390 333 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 POTEAQ6S8J7 498 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 CCNJLQ8IV13 435 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 WNK4Q96J92 1243 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 MTMR9Q96QG7 549 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 SLC24A3Q9HC58 644 aa18.83■□□□□ 0.6
COL18A1-204ENST00000400337 GLRA3O75311 464 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 FBXO21O94952 628 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 TKTL1P51854 596 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 OAZ1P54368 228 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 EFEMP1Q12805 493 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 PAFAH2Q99487 392 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 TSPAN16Q9UKR8 245 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 TIMM13Q9Y5L4 95 aaPredicted RBP18.82■□□□□ 0.6
COL18A1-204ENST00000400337 NDST1P52848 882 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 POU4F1Q01851 419 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 ADNPQ9H2P0 1102 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 BARX2Q9UMQ3 279 aaPredicted RBP18.82■□□□□ 0.6
COL18A1-204ENST00000400337 CLASP2O75122 1294 aaKnown RBP18.82■□□□□ 0.6
COL18A1-204ENST00000400337 MED21Q13503 144 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 TRIP10Q15642 601 aa18.82■□□□□ 0.6
COL18A1-204ENST00000400337 CAPRIN2Q6IMN6 1127 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms