RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 FAM162AQ96A26 154 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 C7orf25Q9BPX7 421 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 BATF3Q9NR55 127 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 COQ6Q9Y2Z9 468 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 PCDHA13Q9Y5I0 950 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 FLT1P17948 1338 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 IGSF9BQ9UPX0 1349 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 A0A087WZ62 844 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 MSCO60682 206 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 NDUFA10O95299 355 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 NDUFB10O96000 172 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 CFIP05156 583 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 ESRRAP11474 423 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 MFSD10Q14728 455 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 TIGD7Q6NT04 549 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 C3orf20Q8ND61 904 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 OMA1Q96E52 524 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 POLG2Q9UHN1 485 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 TRMT6Q9UJA5 497 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 PCDHB11Q9Y5F2 797 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 HECW2Q9P2P5 1572 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 MROH7Q68CQ1 1323 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 MSH4O15457 936 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 VPS4BO75351 444 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 RAB14P61106 215 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 PUDPQ08623 228 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 C16orf59Q7L2K0 433 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 CYGBQ8WWM9 190 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 THAP9Q9H5L6 903 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 ANGPTL2Q9UKU9 493 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 CNTNAP2Q9UHC6 1331 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 MOXD2PA6NHM9 499 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 AP3B1O00203 1094 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 CLASP2O75122 1294 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 APOA1P02647 267 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 RPN2P04844 631 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 CYP2C8P10632 490 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 ACO1P21399 889 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 RCAN1P53805 252 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 GRM4Q14833 912 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 KNOP1Q1ED39 458 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 SGSM1Q2NKQ1 1148 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 FBXL19Q6PCT2 694 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 SNRNP27Q8WVK2 155 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 PDCD10Q9BUL8 212 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 DKK3Q9UBP4 350 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 UBQLN1Q9UMX0 589 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 USP27XA6NNY8 438 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 M0QYT0 321 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 MYBL1P10243 752 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 CLK3P49761 638 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 TOB2Q14106 344 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 FSCN1Q16658 493 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 ZNF697Q5TEC3 545 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 RGMBQ6NW40 437 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 UBXN6Q9BZV1 441 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 NHEJ1Q9H9Q4 299 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 SETD4Q9NVD3 440 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 TIMM8BQ9Y5J9 83 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 VWA5AO00534 786 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 TRIM16O95361 564 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 DLGAP3O95886 979 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 HIC1Q14526 733 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 TEAD4Q15561 434 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 TRIM72Q6ZMU5 477 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 FBXO22Q8NEZ5 403 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 CDCA5Q96FF9 252 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 PPP1R16AQ96I34 528 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 NEDD4P46934 1319 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 ZNF189O75820 626 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 ATP1A3P13637 1013 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 SCRN3Q0VDG4 424 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 CCNIQ14094 377 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 NFIL3Q16649 462 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 NBPF12Q5TAG4 269 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 ADGRF2Q8IZF7 708 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 TAAR1Q96RJ0 339 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 C20orf96Q9NUD7 363 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 HSPBP1Q9NZL4 362 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 ABCC3O15438 1527 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 ROBO2Q9HCK4 1378 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 NKRFO15226 690 aaKnown RBP eCLIP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 STAU1O95793 577 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 ATP5BP06576 529 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 MRPS25P82663 173 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 SRSF11Q05519 484 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 RCN1Q15293 331 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 OLFML2AQ68BL7 652 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 PGBD2Q6P3X8 592 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 UNC13DQ70J99 1090 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 CCDC103Q8IW40 242 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 MCEMP1Q8IX19 187 aa11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 CDK5RAP1Q96SZ6 601 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 GTPBP2Q9BX10 602 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-216ENST00000399638 SOWAHDA6NJG2 315 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 BMP10O95393 424 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 JAK1P23458 1154 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 PRIM2P49643 509 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 SKP1P63208 163 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms