RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 BUB1BO60566 1050 aaPredicted RBP17.07■□□□□ 0.32
TNRC18-202ENST00000399434 PALMO75781 387 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 ABLIM3O94929 683 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 LCP1P13796 627 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 NOP2P46087 812 aaKnown RBP17.07■□□□□ 0.32
TNRC18-202ENST00000399434 NDUFV1P49821 464 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 GNG11P61952 73 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 ZNF268Q14587 947 aaPredicted RBP17.07■□□□□ 0.32
TNRC18-202ENST00000399434 TAF5Q15542 800 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 SDHAF4Q5VUM1 108 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 OR6B2Q6IFH4 312 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 SCUBE3Q8IX30 993 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 MSANTD4Q8NCY6 345 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 SPPL2BQ8TCT7 592 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 NDRG1Q92597 394 aaKnown RBP17.07■□□□□ 0.32
TNRC18-202ENST00000399434 TGS1Q96RS0 853 aaKnown RBP17.07■□□□□ 0.32
TNRC18-202ENST00000399434 UBXN6Q9BZV1 441 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 SYNCQ9H7C4 482 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 PNPLA8Q9NP80 782 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 METTL5Q9NRN9 209 aaKnown RBP17.07■□□□□ 0.32
TNRC18-202ENST00000399434 MRPL17Q9NRX2 175 aaKnown RBP17.07■□□□□ 0.32
TNRC18-202ENST00000399434 PARVAQ9NVD7 372 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 FNIP2Q9P278 1114 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 STK39Q9UEW8 545 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 SCINQ9Y6U3 715 aa17.07■□□□□ 0.32
TNRC18-202ENST00000399434 TMEM191CA6NGB0 347 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 FSCN2O14926 492 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 SEC24AO95486 1093 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 CNPP09543 421 aaKnown RBP17.06■□□□□ 0.32
TNRC18-202ENST00000399434 HAPLN1P10915 354 aaPredicted RBP17.06■□□□□ 0.32
TNRC18-202ENST00000399434 ACADSBP45954 432 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 RAB33AQ14088 237 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 FAM102AQ5T9C2 384 aaPredicted RBP17.06■□□□□ 0.32
TNRC18-202ENST00000399434 VSTM1Q6UX27 236 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 SYT10Q6XYQ8 523 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 SLFN11Q7Z7L1 901 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 C2orf15Q8WU43 125 aaKnown RBP17.06■□□□□ 0.32
TNRC18-202ENST00000399434 POF1BQ8WVV4 589 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 C8orf48Q96LL4 319 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 MCEEQ96PE7 176 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 MIS12Q9H081 205 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 WDR35Q9P2L0 1181 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 TMEM59LQ9UK28 342 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 SLC27A5Q9Y2P5 690 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 CHD7Q9P2D1 2997 aa17.06■□□□□ 0.32
TNRC18-202ENST00000399434 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.05■□□□□ 0.32
TNRC18-202ENST00000399434 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.05■□□□□ 0.32
TNRC18-202ENST00000399434 SIGLEC16A6NMB1 481 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 HIDE1A8MVS5 230 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 RB1P06400 928 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 TNNT1P13805 278 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 ATF6P18850 670 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 IRS1P35568 1242 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 TKTL1P51854 596 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 SLC8A3P57103 927 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 SLC6A3Q01959 620 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 SMARCB1Q12824 385 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 DUSP4Q13115 394 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 C11orf63Q6NUN7 778 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 SCN4BQ8IWT1 228 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 TDHQ8IZJ6 230 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 EMC1Q8N766 993 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 FEZF2Q8TBJ5 459 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 TCF25Q9BQ70 676 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 C11orf84Q9BUA3 381 aaPredicted RBP17.05■□□□□ 0.32
TNRC18-202ENST00000399434 ULBP1Q9BZM6 244 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.05■□□□□ 0.32
TNRC18-202ENST00000399434 AFF4Q9UHB7 1163 aaKnown RBP17.05■□□□□ 0.32
TNRC18-202ENST00000399434 ANAPC7Q9UJX3 599 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 IRAK3Q9Y616 596 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 OBSL1O75147 1896 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 MTCL1Q9Y4B5 1905 aaKnown RBP17.05■□□□□ 0.32
TNRC18-202ENST00000399434 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.05■□□□□ 0.32
TNRC18-202ENST00000399434 EPOPA6NHQ4 379 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 CSPG5O95196 566 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 FTCDO95954 541 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 RFC1P35251 1148 aaPredicted RBP17.05■□□□□ 0.32
TNRC18-202ENST00000399434 FLT3P36888 993 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 GRIK1P39086 918 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 SLC5A3P53794 718 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 NAP1L1P55209 391 aaKnown RBP17.05■□□□□ 0.32
TNRC18-202ENST00000399434 DAOAP59103 153 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 UBE3AQ05086 875 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 PTPROQ16827 1216 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 DDR2Q16832 855 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 PLPP4Q5VZY2 271 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 SLC26A9Q7LBE3 791 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 SCAMP5Q8TAC9 235 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 ZNF461Q8TAF7 563 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 SAMD11Q96NU1 681 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 KLHL5Q96PQ7 755 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 SEPT5Q99719 369 aaPredicted RBP17.05■□□□□ 0.32
TNRC18-202ENST00000399434 LRRC4Q9HBW1 653 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 MRPL47Q9HD33 250 aaKnown RBP17.05■□□□□ 0.32
TNRC18-202ENST00000399434 TLR9Q9NR96 1032 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 DNAI1Q9UI46 699 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 HYOU1Q9Y4L1 999 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 USP3Q9Y6I4 520 aa17.05■□□□□ 0.32
TNRC18-202ENST00000399434 C2orf71A6NGG8 1288 aa17.04■□□□□ 0.32
TNRC18-202ENST00000399434 TRIM66O15016 1216 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms