RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 USP15Q9Y4E8 981 aaPredicted RBP14.49□□□□□ -0.09
PRAME-202ENST00000398743 RRN3P2A6NIE6 340 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 BANF1O75531 89 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 GRAP2O75791 330 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 KRT15P19012 456 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 HOXA11P31270 313 aaPredicted RBP14.48□□□□□ -0.09
PRAME-202ENST00000398743 RGS7P49802 495 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 YARSP54577 528 aaKnown RBP14.48□□□□□ -0.09
PRAME-202ENST00000398743 ROR1Q01973 937 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 TMEM62Q0P6H9 643 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 TFDP2Q14188 446 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 DPYSL3Q14195 570 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 RASA2Q15283 850 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 FAM47CQ5HY64 1035 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 CYP4V2Q6ZWL3 525 aaPredicted RBP14.48□□□□□ -0.09
PRAME-202ENST00000398743 CATSPER4Q7RTX7 472 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 TRPM8Q7Z2W7 1104 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 ANKRD23Q86SG2 305 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 ATP11CQ8NB49 1132 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 BRI3BPQ8WY22 251 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 SNX27Q96L92 541 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 MRPL45Q9BRJ2 306 aaKnown RBP14.48□□□□□ -0.09
PRAME-202ENST00000398743 GCOM2Q9BZD3 368 aaPredicted RBP14.48□□□□□ -0.09
PRAME-202ENST00000398743 FAM49AQ9H0Q0 323 aaPredicted RBP14.48□□□□□ -0.09
PRAME-202ENST00000398743 TMEM51Q9NW97 253 aa14.48□□□□□ -0.09
PRAME-202ENST00000398743 PSMC3IPQ9P2W1 217 aaPredicted RBP14.48□□□□□ -0.09
PRAME-202ENST00000398743 IQCA1LA6NCM1 817 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 PRPF4O43172 522 aaKnown RBP eCLIP14.47□□□□□ -0.09
PRAME-202ENST00000398743 STIP1P31948 543 aaKnown RBP14.47□□□□□ -0.09
PRAME-202ENST00000398743 GPX6P59796 221 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 BASP1P80723 227 aaKnown RBP14.47□□□□□ -0.09
PRAME-202ENST00000398743 CDC42EP1Q00587 391 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 IL9RQ01113 521 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 GAD2Q05329 585 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 MMRN1Q13201 1228 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 KRT81Q14533 505 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 NOMO1Q15155 1222 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 FNBP1LQ5T0N5 605 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 IQSEC1Q6DN90 963 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 PMF1Q6P1K2 205 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 NOTUMQ6P988 496 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 OLFML1Q6UWY5 402 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 ACOT1Q86TX2 421 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 MAP7D3Q8IWC1 876 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 BEST2Q8NFU1 509 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.47□□□□□ -0.09
PRAME-202ENST00000398743 ZMAT2Q96NC0 199 aaKnown RBP14.47□□□□□ -0.09
PRAME-202ENST00000398743 SMC6Q96SB8 1091 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 ADAMTS10Q9H324 1103 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 TRABDQ9H4I3 376 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 FETUBQ9UGM5 382 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 CLUHO75153 1309 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 GLTPD2A6NH11 291 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 E7ESA3 106 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 DPYSL4O14531 572 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 TMEM63AO94886 807 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 SUN1O94901 812 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 SETSIPP0DME0 302 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 DESP17661 470 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 GEMIN4P57678 1058 aaKnown RBP14.47□□□□□ -0.09
PRAME-202ENST00000398743 CCDC14Q49A88 953 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 PKDCCQ504Y2 493 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 EFHC2Q5JST6 749 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 DARS2Q6PI48 645 aaKnown RBP14.47□□□□□ -0.09
PRAME-202ENST00000398743 PNMA8AQ86V59 439 aaPredicted RBP14.47□□□□□ -0.09
PRAME-202ENST00000398743 TTC30AQ86WT1 665 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 PDIK1LQ8N165 341 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 LRRC52Q8N7C0 313 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 EIF2AQ9BY44 585 aaKnown RBP14.47□□□□□ -0.09
PRAME-202ENST00000398743 CXCL16Q9H2A7 254 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 HESX1Q9UBX0 185 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 TUBGCP4Q9UGJ1 667 aa14.47□□□□□ -0.09
PRAME-202ENST00000398743 XPO7Q9UIA9 1087 aaKnown RBP14.47□□□□□ -0.09
PRAME-202ENST00000398743 SMG5Q9UPR3 1016 aaKnown RBP14.47□□□□□ -0.09
PRAME-202ENST00000398743 PPEF2O14830 753 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 GSTA1P08263 222 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 SDC4P31431 198 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 HNRNPH1P31943 449 aaKnown RBP14.46□□□□□ -0.09
PRAME-202ENST00000398743 SLC18A1P54219 525 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 SNX16P57768 344 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 ATP11AP98196 1134 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 SLC6A3Q01959 620 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 PDK2Q15119 407 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 ZKSCAN8Q15776 578 aaPredicted RBP14.46□□□□□ -0.09
PRAME-202ENST00000398743 PKN2Q16513 984 aaKnown RBP14.46□□□□□ -0.09
PRAME-202ENST00000398743 MSS51Q4VC12 460 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 RAB6CQ53S08 254 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 BOLA3Q53S33 107 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 NPNTQ6UXI9 565 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 ZC3H18Q86VM9 953 aaKnown RBP14.46□□□□□ -0.09
PRAME-202ENST00000398743 SESTD1Q86VW0 696 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 TAB3Q8N5C8 712 aaPredicted RBP14.46□□□□□ -0.09
PRAME-202ENST00000398743 FBXO36Q8NEA4 188 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 UPF1Q92900 1129 aaKnown RBP eCLIP14.46□□□□□ -0.09
PRAME-202ENST00000398743 RNF157Q96PX1 679 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 SLC4A5Q9BY07 1137 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 RAB6CQ9H0N0 254 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 FAM49BQ9NUQ9 324 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 RABGEF1Q9UJ41 708 aa14.46□□□□□ -0.09
PRAME-202ENST00000398743 TCRBV7S3A2A0A539 114 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms