RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 CYP4A22Q5TCH4 519 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 SLC9A9Q8IVB4 645 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 FAM71DQ8N9W8 422 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 PPP1R14CQ8TAE6 165 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 ACER1Q8TDN7 264 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 HIC2Q96JB3 615 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 TLE6Q9H808 572 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 QTRT2Q9H974 415 aaKnown RBP10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 GALNT8Q9NY28 637 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 ZNF212Q9UDV6 495 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 SLC7A8Q9UHI5 535 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 MTO1Q9Y2Z2 717 aaKnown RBP10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 DDX60LQ5H9U9 1706 aaKnown RBP10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 SCN7AQ01118 1682 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 E2F8A0AVK6 867 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 SPECC1L-ADORA2AF8WAN1 911 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 I3L4J1 428 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 ZMPSTE24O75844 475 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 ABHD2P08910 425 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 DLDP09622 509 aaKnown RBP10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 UNGP13051 313 aaPredicted RBP10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 AP2B1P63010 937 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 WDR44Q5JSH3 913 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 SCARA3Q6AZY7 606 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 PRR5LQ6MZQ0 368 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 CDHR3Q6ZTQ4 885 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 CEP128Q6ZU80 1094 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 ULK2Q8IYT8 1036 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 SNRNP27Q8WVK2 155 aaKnown RBP10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 CCDC17Q96LX7 622 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 CENPKQ9BS16 269 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 TIPINQ9BVW5 301 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 TMEM8AQ9HCN3 771 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 DOLKQ9UPQ8 538 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 UMODL1Q5DID0 1318 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 MYPNQ86TC9 1320 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 F5H423 210 aaPredicted RBP10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 COPEO14579 308 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 GNA15P30679 374 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 RARRES1P49788 294 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 CHI3L2Q15782 390 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 OCLNQ16625 522 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 NFIL3Q16649 462 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 RALGPS1Q5JS13 557 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 TRAPPC3LQ5T215 181 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 RNASEH2BQ5TBB1 312 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 APOBEC3HQ6NTF7 200 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 RSPH3Q86UC2 560 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 IGDCC3Q8IVU1 814 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 ST13P4Q8IZP2 240 aaPredicted RBP10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 ATP11CQ8NB49 1132 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 ACTL9Q8TC94 416 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 MPP4Q96JB8 637 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 MMP19Q99542 508 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 TRIM56Q9BRZ2 755 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 APOL6Q9BWW8 343 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 DMAP1Q9NPF5 467 aaPredicted RBP10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 RAB6BQ9NRW1 208 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 TLL2Q9Y6L7 1015 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 MYOCOSA0A1B0GUC4 107 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 TRIM49D1C9J1S8 452 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 C6orf222P0C671 652 aaPredicted RBP10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 SH3BP2P78314 561 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 OTUD4Q01804 1114 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 LMNB2Q03252 620 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 TCHHL1Q5QJ38 904 aaPredicted RBP10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 FAM196AQ6ZSG2 479 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 ALLCQ8N6M5 410 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 BANPQ8N9N5 519 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 ZNF511Q8NB15 262 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 IL31RAQ8NI17 732 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 EBF4Q9BQW3 602 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 KCNH7Q9NS40 1196 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 XPO7Q9UIA9 1087 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 SMCHD1A6NHR9 2005 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 P4HA2O15460 535 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 CST8O60676 142 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 TOM1L1O75674 476 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 ITGB5P18084 799 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 YWHABP31946 246 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 ELK3P41970 407 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 STAT2P52630 851 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 BST1Q10588 318 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 MED21Q13503 144 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 MORF4L2Q15014 288 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 TRIP10Q15642 601 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 UGCGQ16739 394 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 SPATA24Q86W54 205 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 PDIK1LQ8N165 341 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 EXD1Q8NHP7 514 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 SKA1Q96BD8 255 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 SLITRK1Q96PX8 696 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 KMT5AQ9NQR1 393 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 SLC24A2Q9UI40 661 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 PCDHB2Q9Y5E7 798 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 ATRNL1Q5VV63 1379 aa10.31□□□□□ -0.76
PTCHD4-202ENST00000398738 SLC26A4O43511 780 aa10.3□□□□□ -0.76
PTCHD4-202ENST00000398738 DLG1Q12959 904 aa10.3□□□□□ -0.76
PTCHD4-202ENST00000398738 TCEAL1Q15170 157 aa10.3□□□□□ -0.76
PTCHD4-202ENST00000398738 MMEL1Q495T6 779 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms