RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 IL37Q9NZH6 218 aa18.33■□□□□ 0.52
CSNK1D-204ENST00000398519 CAPN11Q9UMQ6 739 aa18.33■□□□□ 0.52
CSNK1D-204ENST00000398519 MRPS23Q9Y3D9 190 aaKnown RBP18.33■□□□□ 0.52
CSNK1D-204ENST00000398519 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.33■□□□□ 0.526e-7■■□□□ 12.4
CSNK1D-204ENST00000398519 VCANP13611 3396 aa18.32■□□□□ 0.52
CSNK1D-204ENST00000398519 A0A1W2PRU2 124 aa18.32■□□□□ 0.52
CSNK1D-204ENST00000398519 RTN3O95197 1032 aaPredicted RBP18.32■□□□□ 0.52
CSNK1D-204ENST00000398519 GJA1P17302 382 aa18.32■□□□□ 0.52
CSNK1D-204ENST00000398519 GABRR2P28476 465 aa18.32■□□□□ 0.52
CSNK1D-204ENST00000398519 TAF3Q5VWG9 929 aa18.32■□□□□ 0.52
CSNK1D-204ENST00000398519 PASD1Q8IV76 773 aa18.32■□□□□ 0.52
CSNK1D-204ENST00000398519 SHKBP1Q8TBC3 707 aa18.32■□□□□ 0.52
CSNK1D-204ENST00000398519 SLC20A1Q8WUM9 679 aa18.32■□□□□ 0.52
CSNK1D-204ENST00000398519 CPLX3Q8WVH0 158 aa18.32■□□□□ 0.52
CSNK1D-204ENST00000398519 PHF7Q9BWX1 381 aaPredicted RBP18.32■□□□□ 0.52
CSNK1D-204ENST00000398519 EHD2Q9NZN4 543 aa18.32■□□□□ 0.52
CSNK1D-204ENST00000398519 UXTQ9UBK9 157 aaPredicted RBP18.32■□□□□ 0.52
CSNK1D-204ENST00000398519 ZNF197O14709 1029 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 TADA3O75528 432 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 FGF19O95750 216 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 F11P03951 625 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 FERP16591 822 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 CEBPBP17676 345 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 YWHAQP27348 245 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 CASP14P31944 242 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 KRT9P35527 623 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 KIF11P52732 1056 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 RAB41Q5JT25 222 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 PMF1Q6P1K2 205 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 IRF2BP2Q7Z5L9 587 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.31■□□□□ 0.524e-6■■■□□ 14.8
CSNK1D-204ENST00000398519 ING5Q8WYH8 240 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 MRFAP1L1Q96HT8 127 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 CYTH4Q9UIA0 394 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 OBSL1O75147 1896 aa18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 ZNF638Q14966 1978 aaKnown RBP18.31■□□□□ 0.52
CSNK1D-204ENST00000398519 FAM92AA1XBS5 289 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 MMEP08473 750 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 BMP1P13497 986 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 SP100P23497 879 aaPredicted RBP18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 CDC25CP30307 473 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 RGS7P49802 495 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 ZBED6P86452 979 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 TAF10Q12962 218 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 SFMBT2Q5VUG0 894 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 POTEHQ6S545 545 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 ZNF677Q86XU0 584 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 FMNL3Q8IVF7 1028 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 WDTC1Q8N5D0 677 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 KCTD13Q8WZ19 329 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 FGF13Q92913 245 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 LHX5Q9H2C1 402 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 ATXN3LQ9H3M9 355 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 COMMD8Q9NX08 183 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 AIPL1Q9NZN9 384 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 USP3Q9Y6I4 520 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 GABBR2O75899 941 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 CHRNB2P17787 502 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 CYP4F8P98187 520 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 FMO1Q01740 532 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 CDR2Q01850 454 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 TRIM14Q14142 442 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 TEAD2Q15562 447 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 ASIC2Q16515 512 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 STXBP5Q5T5C0 1151 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 TMC6Q7Z403 805 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 NPAS3Q8IXF0 933 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 ZNF397Q8NF99 534 aaPredicted RBP18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 FBXO32Q969P5 355 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 GCNAQ96QF7 691 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 MYADMQ96S97 322 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 FBXO44Q9H4M3 255 aa18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.3■□□□□ 0.527e-8■■■■■ 49.6
CSNK1D-204ENST00000398519 LUC7L2Q9Y383 392 aaKnown RBP18.3■□□□□ 0.52
CSNK1D-204ENST00000398519 MYO16Q9Y6X6 1858 aa18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 CCDC172P0C7W6 258 aa18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 RPL34P49207 117 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 TKTL1P51854 596 aa18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 ADIGQ0VDE8 80 aa18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 C1orf131Q8NDD1 294 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 STK32AQ8WU08 396 aa18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 RPGRIP1Q96KN7 1286 aa18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 HSFY1Q96LI6 401 aa18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 SLITRK1Q96PX8 696 aa18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 NUCKS1Q9H1E3 243 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 PDCL3Q9H2J4 239 aa18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 GMIPQ9P107 970 aa18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 CDH7Q9ULB5 785 aa18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 SCML2Q9UQR0 700 aa18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 USTQ9Y2C2 406 aa18.29■□□□□ 0.52
CSNK1D-204ENST00000398519 PIK3R2O00459 728 aa18.28■□□□□ 0.52
CSNK1D-204ENST00000398519 GBP2P32456 591 aaPredicted RBP18.28■□□□□ 0.52
CSNK1D-204ENST00000398519 CDH5P33151 784 aaPredicted RBP18.28■□□□□ 0.52
CSNK1D-204ENST00000398519 TBX2Q13207 712 aaPredicted RBP18.28■□□□□ 0.52
CSNK1D-204ENST00000398519 PDCLQ13371 301 aa18.28■□□□□ 0.52
CSNK1D-204ENST00000398519 OTOP3Q7RTS5 596 aa18.28■□□□□ 0.52
CSNK1D-204ENST00000398519 CCDC186Q7Z3E2 898 aa18.28■□□□□ 0.52
CSNK1D-204ENST00000398519 OVCA2Q8WZ82 227 aa18.28■□□□□ 0.52
CSNK1D-204ENST00000398519 SYN2Q92777 582 aaPredicted RBP18.28■□□□□ 0.52
CSNK1D-204ENST00000398519 SYT11Q9BT88 431 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms