RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 PIGZQ86VD9 579 aa14.97□□□□□ -0.01
SKA1-202ENST00000398452 REXO1L1PQ8IX06 675 aa14.97□□□□□ -0.01
SKA1-202ENST00000398452 SYCE1Q8N0S2 351 aa14.97□□□□□ -0.01
SKA1-202ENST00000398452 C17orf53Q8N3J3 647 aaPredicted RBP14.97□□□□□ -0.01
SKA1-202ENST00000398452 SLC35F5Q8WV83 523 aa14.97□□□□□ -0.01
SKA1-202ENST00000398452 POF1BQ8WVV4 589 aa14.97□□□□□ -0.01
SKA1-202ENST00000398452 GOLGA1Q92805 767 aa14.97□□□□□ -0.01
SKA1-202ENST00000398452 PGLYRP2Q96PD5 576 aa14.97□□□□□ -0.01
SKA1-202ENST00000398452 SEPT5Q99719 369 aaPredicted RBP14.97□□□□□ -0.01
SKA1-202ENST00000398452 TCF25Q9BQ70 676 aa14.97□□□□□ -0.01
SKA1-202ENST00000398452 C17orf80Q9BSJ5 609 aa14.97□□□□□ -0.01
SKA1-202ENST00000398452 UBXN6Q9BZV1 441 aa14.97□□□□□ -0.01
SKA1-202ENST00000398452 ZBP1Q9H171 429 aa14.97□□□□□ -0.01
SKA1-202ENST00000398452 NGRNQ9NPE2 291 aaKnown RBP14.97□□□□□ -0.01
SKA1-202ENST00000398452 AVENQ9NQS1 362 aaPredicted RBP14.97□□□□□ -0.01
SKA1-202ENST00000398452 TLR9Q9NR96 1032 aa14.97□□□□□ -0.01
SKA1-202ENST00000398452 EYSQ5T1H1 3165 aa14.97□□□□□ -0.01
SKA1-202ENST00000398452 USP27XA6NNY8 438 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 C5orf67F2Z3F1 127 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 GOLGA8SH3BPF8 625 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 ADH1AP07327 375 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 LCP1P13796 627 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 RRM1P23921 792 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 GNG11P61952 73 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 ROR1Q01973 937 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 GPM6BQ13491 265 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 ZNF268Q14587 947 aaPredicted RBP14.96□□□□□ -0.01
SKA1-202ENST00000398452 TAF12Q16514 161 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 PTPN20Q4JDL3 420 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 PKDCCQ504Y2 493 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 PDE12Q6L8Q7 609 aaKnown RBP14.96□□□□□ -0.01
SKA1-202ENST00000398452 PMF1Q6P1K2 205 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 LRRTM3Q86VH5 581 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 WDTC1Q8N5D0 677 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 TRIM58Q8NG06 486 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 ZNF564Q8TBZ8 553 aaPredicted RBP14.96□□□□□ -0.01
SKA1-202ENST00000398452 CPXM1Q96SM3 734 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 PKMYT1Q99640 499 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 NUP85Q9BW27 656 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 VN1R3Q9BXE9 311 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 MFRPQ9BY79 579 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 LACRTQ9GZZ8 138 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 ALG13Q9NP73 1137 aaKnown RBP14.96□□□□□ -0.01
SKA1-202ENST00000398452 TMLHEQ9NVH6 421 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 EHD2Q9NZN4 543 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 FNIP2Q9P278 1114 aa14.96□□□□□ -0.01
SKA1-202ENST00000398452 AFF4Q9UHB7 1163 aaKnown RBP14.96□□□□□ -0.01
SKA1-202ENST00000398452 NCANO14594 1321 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 MTMR11A4FU01 709 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 E5RJQ4 531 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 PRRG1O14668 218 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 BUB1O43683 1085 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 FBXO21O94952 628 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 EFEMP2O95967 443 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 CYP1A2P05177 515 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 RPL17P18621 184 aaKnown RBP14.95□□□□□ -0.02
SKA1-202ENST00000398452 KLRC2P26717 231 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 MAGEA11P43364 429 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 ERVK-21P61565 698 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 ADCY1Q08828 1119 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 FAM102AQ5T9C2 384 aaPredicted RBP14.95□□□□□ -0.02
SKA1-202ENST00000398452 CYP4A22Q5TCH4 519 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 PLPP4Q5VZY2 271 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 ELMSAN1Q6PJG2 1045 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 PAQR9Q6ZVX9 377 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 TMEM110Q86TL2 294 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 DNAAF5Q86Y56 855 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 C3orf20Q8ND61 904 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 OLIG1Q8TAK6 271 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 SLC35G2Q8TBE7 412 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 KCTD13Q8WZ19 329 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 C16orf45Q96MC5 204 aaPredicted RBP14.95□□□□□ -0.02
SKA1-202ENST00000398452 SLC4A5Q9BY07 1137 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 PNPLA8Q9NP80 782 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 MAFFQ9ULX9 164 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 TFR2Q9UP52 801 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 PAXBP1Q9Y5B6 917 aa14.95□□□□□ -0.02
SKA1-202ENST00000398452 TTC28Q96AY4 2481 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 PTPRSQ13332 1948 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 RCCD1A6NED2 376 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 F8VP50 259 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 MYO1FO00160 1098 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 ZNF500O60304 480 aaPredicted RBP14.94□□□□□ -0.02
SKA1-202ENST00000398452 TBC1D4O60343 1298 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 CSPG5O95196 566 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 MOCS3O95396 460 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 ERBB2P04626 1255 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 KRT3P12035 628 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 CYP2F1P24903 491 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 ARHGAP25P42331 645 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 GABRB2P47870 512 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 ALDH1A3P47895 512 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 TKTL1P51854 596 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 CDR1P51861 262 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 ADIGQ0VDE8 80 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 PLD1Q13393 1074 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 RAB33AQ14088 237 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 VEPH1Q14D04 833 aa14.94□□□□□ -0.02
SKA1-202ENST00000398452 SKIV2LQ15477 1246 aaKnown RBP14.94□□□□□ -0.02
SKA1-202ENST00000398452 CCDC142Q17RM4 750 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms