RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ZC3H7BQ9UGR2 993 aaKnown RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 MYH8P13535 1937 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 NFASCO94856 1347 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 AMPD1P23109 780 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 IVDP26440 423 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 ABCD1P33897 745 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 MTFR1Q15390 333 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 NBPF20Q3BBV1 942 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 HSP90AA5PQ58FG0 334 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 ZCCHC23Q6ZST2 131 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 PID1Q7Z2X4 250 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 SMC1BQ8NDV3 1235 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF317Q96PQ6 595 aaPredicted RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 CCSER2Q9H7U1 834 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 PCDH9Q9HC56 1237 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 MRPL42Q9Y6G3 142 aaKnown RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 TRPM3Q9HCF6 1732 aaPredicted RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 BHMG1C9JSJ3 638 aaPredicted RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 STBD1O95210 358 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 KDSRQ06136 332 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 Q3C1V9 767 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 SWT1Q5T5J6 900 aaKnown RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 SH3PXD2AQ5TCZ1 1133 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 RNF43Q68DV7 783 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 RHBDF2Q6PJF5 856 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 AGR3Q8TD06 166 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 LRRC37BQ96QE4 947 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 TTC1Q99614 292 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 ACO2Q99798 780 aaKnown RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 IFT122Q9HBG6 1241 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 DRG1Q9Y295 367 aaKnown RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 SSX2IPQ9Y2D8 614 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 ATRNL1Q5VV63 1379 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 MGRN1O60291 552 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 LYPLA1O75608 230 aaPredicted RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 KRT37O76014 449 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 NDST1P52848 882 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 EMC10Q5UCC4 262 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 TMEM192Q8IY95 271 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 LRRC43Q8N309 656 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 TEPSINQ96N21 525 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 TSPYL2Q9H2G4 693 aaPredicted RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 AAASQ9NRG9 546 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 DPP3Q9NY33 737 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 WDR35Q9P2L0 1181 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 ARHGAP28Q9P2N2 729 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 SLC24A2Q9UI40 661 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 TTLL3Q9Y4R7 772 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 C5P01031 1676 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 FAM237BA0A1B0GVD1 139 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 CFLARO15519 480 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 HCRTO43612 131 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 MYL2P10916 166 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 NME3Q13232 169 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 CUL3Q13618 768 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 THOC5Q13769 683 aaKnown RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 GJC2Q5T442 439 aaPredicted RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 NXNQ6DKJ4 435 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 FAM183BPQ6ZVS7 135 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 FBXL18Q96ME1 805 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 FERMT1Q9BQL6 677 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 R3HDMLQ9H3Y0 253 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 TMEM63AO94886 807 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 SH2D4BQ5SQS7 431 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 EFCAB3Q8N7B9 438 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 NSL1Q96IY1 281 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 TWNKQ96RR1 684 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 RXFP1Q9HBX9 757 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 SNTG2Q9NY99 539 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 MCM8Q9UJA3 840 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 DNAJC16Q9Y2G8 782 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 NR2E3Q9Y5X4 410 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 A0A0B4J269 797 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 DDNO94850 711 aaPredicted RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 F7P08709 466 aaPredicted RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 SERPINB3P29508 390 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 PGM1P36871 562 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 GARSP41250 739 aaKnown RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 RBP5P82980 135 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 STX3Q13277 289 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF268Q14587 947 aaPredicted RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 TCEAL1Q15170 157 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 RNASEH2BQ5TBB1 312 aaKnown RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 CES3Q6UWW8 571 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 METTL7BQ6UX53 244 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 RGS9BPQ6ZS82 235 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 VPS37AQ8NEZ2 397 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 AGAP3Q96P47 875 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 STK10O94804 968 aaKnown RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 UBTFL6P0CB48 400 aaPredicted RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 ABCG1P45844 678 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 ATN1P54259 1190 aaPredicted RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 SARNPP82979 210 aaKnown RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 TMEM63BQ5T3F8 832 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 APOBEC3FQ8IUX4 373 aaKnown RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 RIBC1Q8N443 379 aaPredicted RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 SEC14L1Q92503 715 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF518BQ9C0D4 1074 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 RSAD1Q9HA92 442 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms